RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CISD2Q8N5K1 135 aaKnown RBP17.99■□□□□ 0.47
SF3A1-205ENST00000463818 FBXO15Q8NCQ5 510 aaPredicted RBP17.99■□□□□ 0.47
SF3A1-205ENST00000463818 PPFIBP2Q8ND30 876 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 CALML6Q8TD86 181 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 ACTRT1Q8TDG2 376 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 GRK7Q8WTQ7 553 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 ZNF480Q8WV37 535 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 TM9SF4Q92544 642 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 KCNJ9Q92806 393 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 SNRNP40Q96DI7 357 aaKnown RBP17.99■□□□□ 0.47
SF3A1-205ENST00000463818 OSBPL9Q96SU4 736 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 TAC3Q9UHF0 121 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 FBXO5Q9UKT4 447 aa17.99■□□□□ 0.47
SF3A1-205ENST00000463818 IGKV1-8A0A0C4DH67 115 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 E7ENX8 843 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 GFYI3L273 518 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 ZBTB14O43829 449 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 PHF2O75151 1096 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 AGFG2O95081 481 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 SLC16A8O95907 504 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 SYF2O95926 243 aaKnown RBP17.98■□□□□ 0.47
SF3A1-205ENST00000463818 FNTAP49354 379 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 TAP2Q03519 686 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 KLC1Q07866 573 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 EIF2S3LQ2VIR3 472 aaKnown RBP17.98■□□□□ 0.47
SF3A1-205ENST00000463818 HSP90AA5PQ58FG0 334 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 ICE2Q659A1 982 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 PPIL6Q8IXY8 311 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 PRSS58Q8IYP2 241 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 IQCKQ8N0W5 287 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 STT3BQ8TCJ2 826 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 MIEF2Q96C03 454 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 CABS1Q96KC9 395 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 C10orf90Q96M02 699 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 GPR21Q99679 349 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 CRB3Q9BUF7 120 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 LRRC4CQ9HCJ2 640 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 ABCF3Q9NUQ8 709 aa17.98■□□□□ 0.47
SF3A1-205ENST00000463818 ZNF282Q9UDV7 671 aaPredicted RBP17.98■□□□□ 0.47
SF3A1-205ENST00000463818 ANKRD12Q6UB98 2062 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 VPS26AO75436 327 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 CCNDBP1O95273 360 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 ZGLP1P0C6A0 271 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 ENO3P13929 434 aaPredicted RBP17.97■□□□□ 0.47
SF3A1-205ENST00000463818 CARSP49589 748 aaKnown RBP17.97■□□□□ 0.47
SF3A1-205ENST00000463818 EMP3P54852 163 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 MPP1Q00013 466 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 MRPL49Q13405 166 aaKnown RBP17.97■□□□□ 0.47
SF3A1-205ENST00000463818 TUBB8Q3ZCM7 444 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 ZNF425Q6IV72 752 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 Q6ZS92 163 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 CSNK1A1LQ8N752 337 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
SF3A1-205ENST00000463818 OR11G2Q8NGC1 345 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 CD200R1Q8TD46 325 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 VPS50Q96JG6 964 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 OR2A5Q96R48 311 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 MESP1Q9BRJ9 268 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 AARSD1Q9BTE6 412 aaKnown RBP17.97■□□□□ 0.47
SF3A1-205ENST00000463818 SLC29A3Q9BZD2 475 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 ILKAPQ9H0C8 392 aaPredicted RBP17.97■□□□□ 0.47
SF3A1-205ENST00000463818 KCNF1Q9H3M0 494 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 SYNPO2LQ9H987 977 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 IARS2Q9NSE4 1012 aaKnown RBP17.97■□□□□ 0.47
SF3A1-205ENST00000463818 ASF1BQ9NVP2 202 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 UTP6Q9NYH9 597 aaKnown RBP17.97■□□□□ 0.47
SF3A1-205ENST00000463818 CDC14AQ9UNH5 594 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 COMMD10Q9Y6G5 202 aa17.97■□□□□ 0.47
SF3A1-205ENST00000463818 GOLGA6L10A0A0M3HER8 536 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 SMAPO00193 183 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 FBLP22087 321 aaKnown RBP17.96■□□□□ 0.47
SF3A1-205ENST00000463818 ABATP80404 500 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 PPP1R7Q15435 360 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 HKDC1Q2TB90 917 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 VWA2Q5GFL6 755 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 RNASEH2BQ5TBB1 312 aaKnown RBP17.96■□□□□ 0.47
SF3A1-205ENST00000463818 AGAP7PQ5VUJ5 663 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 IRAK1BP1Q5VVH5 260 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 LAPTM4BQ86VI4 370 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 LRRC56Q8IYG6 542 aaPredicted RBP17.96■□□□□ 0.47
SF3A1-205ENST00000463818 CPNE9Q8IYJ1 553 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 AGAP4Q96P64 663 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 YIPF2Q9BWQ6 316 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 C3orf18Q9UK00 162 aa17.96■□□□□ 0.47
SF3A1-205ENST00000463818 RUVBL1Q9Y265 456 aaKnown RBP17.96■□□□□ 0.47
SF3A1-205ENST00000463818 USP9XQ93008 2570 aaPredicted RBP17.95■□□□□ 0.46
SF3A1-205ENST00000463818 ZSCAN12O43309 604 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 SEMA7AO75326 666 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 SKIV2L2P42285 1042 aaKnown RBP17.95■□□□□ 0.46
SF3A1-205ENST00000463818 GLRBP48167 497 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 RELAQ04206 551 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 Q0VFX4 171 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 HIF1AQ16665 826 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 CRB2Q5IJ48 1285 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 THEMIS2Q5TEJ8 643 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 ATG9BQ674R7 924 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 UBE2R2Q712K3 238 aaPredicted RBP17.95■□□□□ 0.46
SF3A1-205ENST00000463818 PIWIL4Q7Z3Z4 852 aaKnown RBP17.95■□□□□ 0.46
SF3A1-205ENST00000463818 ADCK2Q7Z695 626 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 CUZD1Q86UP6 607 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms