RNA–Protein interactions for RNA: ENST00000463672.1

GGA1-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 3

Gene GGA1, Length 367 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-217	ENST00000463672	ACSBG2	Q5FVE4	666 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	GARNL3	Q5VVW2	1013 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	ICE2	Q659A1	982 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	SHISA6	Q6ZSJ9	500 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	CAND1	Q86VP6	1230 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	REXO1L1P	Q8IX06	675 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	OR4N4	Q8N0Y3	316 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	RASGEF1C	Q8N431	466 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	OR11G2	Q8NGC1	345 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	CALML6	Q8TD86	181 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	INPP5D	Q92835	1189 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	RERG	Q96A58	199 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	MAGOHB	Q96A72	148 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	C19orf60	Q96EN9	201 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	PBK	Q96KB5	322 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	C10orf90	Q96M02	699 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	BARD1	Q99728	777 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	PPP2R2C	Q9Y2T4	447 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	JRKL	Q9Y4A0	524 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	ANKRD12	Q6UB98	2062 aa		13.55	□□□□□ -0.24
GGA1-217	ENST00000463672	ANKUB1	A6NFN9	424 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	EIF3F	O00303	357 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	NRP2	O60462	931 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	SLC16A8	O95907	504 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	MPC1L	P0DKB6	136 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	FDXR	P22570	491 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	TSFM	P43897	325 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	GLRB	P48167	497 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	TERF1	P54274	439 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	CCZ1B	P86790	482 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	CCZ1	P86791	482 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	LONRF1	Q17RB8	773 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	CRB2	Q5IJ48	1285 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	ANKRD22	Q5VYY1	191 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	LRRC8E	Q6NSJ5	796 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	TTC27	Q6P3X3	843 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	CCDC137	Q6PK04	289 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	SUSD1	Q6UWL2	747 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	CUZD1	Q86UP6	607 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	PAQR7	Q86WK9	346 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	TMEM151B	Q8IW70	566 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	PARP9	Q8IXQ6	854 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	CSNK1A1L	Q8N752	337 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	GRK7	Q8WTQ7	553 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	THOC3	Q96J01	351 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	SERPINB12	Q96P63	405 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	PKP4	Q99569	1192 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	EBNA1BP2	Q99848	306 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	GALP	Q9UBC7	116 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	TAC3	Q9UHF0	121 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	C3orf18	Q9UK00	162 aa		13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	NOVA2	Q9UNW9	492 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-217	ENST00000463672	NAV2	Q8IVL1	2488 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	PRRC2C	Q9Y520	2896 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ZCWPW2	A0A1B0GU75	182 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672		A0A1W2PQ72	361 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672		E7ENX8	843 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672		H0YGG7	62 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ZBTB14	O43829	449 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ALOX12B	O75342	701 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	MED26	O95402	600 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ANXA5	P08758	320 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	CXCR2	P25025	360 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	SLC1A2	P43004	574 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ARF3	P61204	181 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	AP2B1	P63010	937 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	TAP2	Q03519	686 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	MFAP5	Q13361	173 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	TSTA3	Q13630	321 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ZNF169	Q14929	603 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	TLR1	Q15399	786 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	CYP1B1	Q16678	543 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ZNF425	Q6IV72	752 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	FBXO42	Q6P3S6	717 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ISLR2	Q6UXK2	745 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ST6GALNAC3	Q8NDV1	305 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	DNAJB14	Q8TBM8	379 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	ZNF480	Q8WV37	535 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	FAM167B	Q9BTA0	163 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	DRC3	Q9H069	523 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	RUVBL1	Q9Y265	456 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	SLC5A6	Q9Y289	635 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	DHRS7	Q9Y394	339 aa		13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	UTP20	O75691	2785 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-217	ENST00000463672	NSG1	A0A0A6YYJ2	146 aa		13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	IGKV1-8	A0A0C4DH67	115 aa		13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	GFY	I3L273	518 aa		13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	SMAP	O00193	183 aa		13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	PGRMC1	O00264	195 aa	Known RBP	13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	KIF5C	O60282	957 aa		13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	SYF2	O95926	243 aa	Known RBP	13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	HRH2	P25021	359 aa		13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	COIL	P38432	576 aa	Predicted RBP	13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	SKIV2L2	P42285	1042 aa	Known RBP	13.52	□□□□□ -0.25
GGA1-217	ENST00000463672	MAGEA3	P43357	314 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms