RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 RRAGDQ9NQL2 400 aaPredicted RBP16.38■□□□□ 0.21
TOP3A-202ENST00000461127 PCDHGB6Q9Y5F9 930 aa16.38■□□□□ 0.21
TOP3A-202ENST00000461127 MAP1AP78559 2803 aaPredicted RBP16.38■□□□□ 0.21
TOP3A-202ENST00000461127 ABCA4P78363 2273 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 IGLV3-12A0A075B6K2 115 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 E9PLN8 166 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 CCL22O00626 93 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 PRPF4O43172 522 aaKnown RBP eCLIP16.37■□□□□ 0.21
TOP3A-202ENST00000461127 FKBP9O95302 570 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 RPN2P04844 631 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 HEXBP07686 556 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 CELA2AP08217 269 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 CD9P21926 228 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 PAFAH1B1P43034 410 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 PPP2R2AP63151 447 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 MUM1Q2TAK8 710 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 NEK10Q6ZWH5 1172 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 LAPTM4BQ86VI4 370 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 TAX1BP1Q86VP1 789 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 C2orf73Q8N5S3 287 aaPredicted RBP16.37■□□□□ 0.21
TOP3A-202ENST00000461127 AGAP11Q8TF27 550 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 NAP1L3Q99457 506 aaPredicted RBP16.37■□□□□ 0.21
TOP3A-202ENST00000461127 VKORC1Q9BQB6 163 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 FERMT1Q9BQL6 677 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 YIPF2Q9BWQ6 316 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 C14orf105Q9NVL8 296 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 ZC3H7BQ9UGR2 993 aaKnown RBP16.37■□□□□ 0.21
TOP3A-202ENST00000461127 CDC14AQ9UNH5 594 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 AAR2Q9Y312 384 aaKnown RBP16.37■□□□□ 0.21
TOP3A-202ENST00000461127 ACANP16112 2415 aa16.37■□□□□ 0.21
TOP3A-202ENST00000461127 HACD1B0YJ81 288 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 TARM1B6A8C7 271 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 BHMG1C9JSJ3 638 aaPredicted RBP16.36■□□□□ 0.21
TOP3A-202ENST00000461127 PGRMC1O00264 195 aaKnown RBP16.36■□□□□ 0.21
TOP3A-202ENST00000461127 RASGRF2O14827 1237 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 WISP2O76076 250 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 TSPAN12O95859 305 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 ERVK-10P10266 1014 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 CKAP4Q07065 602 aaKnown RBP16.36■□□□□ 0.21
TOP3A-202ENST00000461127 PRPSAP1Q14558 356 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 WHAMMP3Q1A5X7 153 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 DNAJC21Q5F1R6 531 aaKnown RBP16.36■□□□□ 0.21
TOP3A-202ENST00000461127 KAZNQ674X7 775 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 NCCRP1Q6ZVX7 275 aaPredicted RBP16.36■□□□□ 0.21
TOP3A-202ENST00000461127 TMEM200AQ86VY9 491 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 LINC01555Q8NAE3 123 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 LRRC45Q96CN5 670 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 QKIQ96PU8 341 aaKnown RBP eCLIP16.36■□□□□ 0.21
TOP3A-202ENST00000461127 OSBPL8Q9BZF1 889 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 ZNF700Q9H0M5 742 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 TRPC4Q9UBN4 977 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 TNFRSF10DQ9UBN6 386 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 RNF14Q9UBS8 474 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 PPT2Q9UMR5 302 aa16.36■□□□□ 0.21
TOP3A-202ENST00000461127 SLC5A10A0PJK1 596 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 NPIPA5E9PKD4 350 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 F8W8V4 182 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 PRRG2O14669 202 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 FGGP02679 453 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 EIF2S1P05198 315 aaKnown RBP16.35■□□□□ 0.21
TOP3A-202ENST00000461127 ADRA1AP35348 466 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 CDKN2BP42772 138 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 DBN1Q16643 649 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 AADACL2Q6P093 401 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 TGIF2LYQ8IUE0 185 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 GHDCQ8N2G8 530 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 RASGEF1CQ8N431 466 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 MS4A14Q96JA4 679 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 DNAJC1Q96KC8 554 aaKnown RBP16.35■□□□□ 0.21
TOP3A-202ENST00000461127 ZNF559Q9BR84 538 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 TUBB6Q9BUF5 446 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 HEMGNQ9BXL5 484 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 TSPAN10Q9H1Z9 355 aaPredicted RBP16.35■□□□□ 0.21
TOP3A-202ENST00000461127 FEZ2Q9UHY8 353 aaPredicted RBP16.35■□□□□ 0.21
TOP3A-202ENST00000461127 SLC39A10Q9ULF5 831 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 NPIPA1Q9UND3 350 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 MRFAP1Q9Y605 127 aa16.35■□□□□ 0.21
TOP3A-202ENST00000461127 PRRC2AP48634 2157 aaKnown RBP16.35■□□□□ 0.21
TOP3A-202ENST00000461127 INTS1Q8N201 2190 aaKnown RBP16.35■□□□□ 0.21
TOP3A-202ENST00000461127 hCG_1818297A0A087WSY0 165 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 A8MUI8 341 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 H7C0S8 307 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 CTSVO60911 334 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 TJP3O95049 919 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 OR56A5P0C7T3 313 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 PRSS56P0CW18 603 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 EEF1DP29692 281 aaKnown RBP16.34■□□□□ 0.21
TOP3A-202ENST00000461127 DNAJA1P31689 397 aaKnown RBP16.34■□□□□ 0.21
TOP3A-202ENST00000461127 PTPN7P35236 360 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 OLIG2Q13516 323 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 DSG2Q14126 1118 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 ITIH4Q14624 930 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 NAPRTQ6XQN6 538 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 SLC13A5Q86YT5 568 aaPredicted RBP16.34■□□□□ 0.21
TOP3A-202ENST00000461127 CREG2Q8IUH2 290 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 DCUN1D3Q8IWE4 304 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 DNAAF3Q8N9W5 541 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 FAM98AQ8NCA5 519 aaKnown RBP16.34■□□□□ 0.21
TOP3A-202ENST00000461127 OR2L8Q8NGY9 312 aa16.34■□□□□ 0.21
TOP3A-202ENST00000461127 ACTRT1Q8TDG2 376 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms