RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 GPSM1Q86YR5 675 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 TCAIMQ8N3R3 496 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 STAG3L4Q8TBR4 150 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 DCAKDQ8WVC6 231 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 KIAA1191Q96A73 305 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 LRFN5Q96NI6 719 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 ZFYVE21Q9BQ24 234 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 VPS11Q9H270 941 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 GPN2Q9H9Y4 310 aaPredicted RBP17.65■□□□□ 0.42
DDR1-241ENST00000460944 SRPK3Q9UPE1 567 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 ZZEF1O43149 2961 aa17.65■□□□□ 0.42
DDR1-241ENST00000460944 NCF1BA6NI72 391 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 NCF1CA8MVU1 366 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 ZNF749O43361 778 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 SRPX2O60687 465 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 CTSVO60911 334 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 ALDOAP04075 364 aaKnown RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 NCF1P14598 390 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 TFEBP19484 476 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 STAT5AP42229 794 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 VSNL1P62760 191 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 TGFBIQ15582 683 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 FAM83EQ2M2I3 478 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 COL28A1Q2UY09 1125 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 PRAMEF17Q5VTA0 474 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 ZNF425Q6IV72 752 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 KLC3Q6P597 504 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 RNF44Q7L0R7 432 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 CNPY4Q8N129 248 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 ZNF655Q8N720 491 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 TTC29Q8NA56 475 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 ZSCAN1Q8NBB4 408 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 KCTD4Q8WVF5 259 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 PYCR2Q96C36 320 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 NDC1Q9BTX1 674 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 SPRTNQ9H040 489 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 ALG9Q9H6U8 611 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 LHX9Q9NQ69 397 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 TXLNGQ9NUQ3 528 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 TMEM184CQ9NVA4 438 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 CUEDC1Q9NWM3 386 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 WWOXQ9NZC7 414 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.64■□□□□ 0.41
DDR1-241ENST00000460944 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 DYRK1BQ9Y463 629 aa17.64■□□□□ 0.41
DDR1-241ENST00000460944 V9GYY5 206 aaPredicted RBP17.64■□□□□ 0.41
DDR1-241ENST00000460944 IGKV1-8A0A0C4DH67 115 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 LOC101059948A0A1B0GTJ6 334 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 TRIM49D1C9J1S8 452 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 H7BY64 318 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 SNRPAP09012 282 aaKnown RBP17.63■□□□□ 0.41
DDR1-241ENST00000460944 LIFP15018 202 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 EZRP15311 586 aaKnown RBP17.63■□□□□ 0.41
DDR1-241ENST00000460944 VSX2P58304 361 aaPredicted RBP17.63■□□□□ 0.41
DDR1-241ENST00000460944 CXADRP78310 365 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 GPS2Q13227 327 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 GRM7Q14831 915 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 OR4D1Q15615 310 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 PTCHD3Q3KNS1 767 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 CDKL4Q5MAI5 379 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 EXT2Q93063 718 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 MR1Q95460 341 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 RERGQ96A58 199 aaPredicted RBP17.63■□□□□ 0.41
DDR1-241ENST00000460944 PTERQ96BW5 349 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 PRAP1Q96NZ9 151 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 DHRS4Q9BTZ2 278 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 CNOT10Q9H9A5 744 aaKnown RBP17.63■□□□□ 0.41
DDR1-241ENST00000460944 IGSF5Q9NSI5 407 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 CD274Q9NZQ7 290 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 FETUBQ9UGM5 382 aa17.63■□□□□ 0.41
DDR1-241ENST00000460944 FER1L5A0AVI2 2057 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 KMT2BQ9UMN6 2715 aaPredicted RBP17.62■□□□□ 0.41
DDR1-241ENST00000460944 CCDC189A1A4V9 331 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 MEN1O00255 615 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 HAT1O14929 419 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 NRP2O60462 931 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 GRK3P35626 688 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 DLSTP36957 453 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 GMPRP36959 345 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 ARSFP54793 590 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 IRF9Q00978 393 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 RELAQ04206 551 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 VAC14Q08AM6 782 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 DLG1Q12959 904 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 SRSF6Q13247 344 aaKnown RBP17.62■□□□□ 0.41
DDR1-241ENST00000460944 YOD1Q5VVQ6 348 aaPredicted RBP17.62■□□□□ 0.41
DDR1-241ENST00000460944 SULT1C3Q6IMI6 304 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 RHBDD2Q6NTF9 364 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 WDR93Q6P2C0 686 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 CENPLQ8N0S6 344 aaPredicted RBP17.62■□□□□ 0.41
DDR1-241ENST00000460944 PROKR1Q8TCW9 393 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 ISL2Q96A47 359 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 RHBDF1Q96CC6 855 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 NXNL1Q96CM4 212 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 MTBPQ96DY7 904 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 TSNARE1Q96NA8 513 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 EPB41L4BQ9H329 900 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 CPNE5Q9HCH3 593 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 PCMTD2Q9NV79 361 aa17.62■□□□□ 0.41
DDR1-241ENST00000460944 NUDT4Q9NZJ9 180 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms