RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SLC5A3P53794 718 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 C16orf46Q6P387 395 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 LARP4Q71RC2 724 aaKnown RBP eCLIP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PRSS48Q7RTY5 328 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 RNF31Q96EP0 1072 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 HIST1H2AAQ96QV6 131 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SYT3Q9BQG1 590 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CDADC1Q9BWV3 514 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TAS2R9Q9NYW1 312 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 RIMKLBQ9ULI2 386 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SLC22A7Q9Y694 548 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PATJQ8NI35 1801 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PHIPQ8WWQ0 1821 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CDC7O00311 574 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SBK2P0C263 348 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 NIPAL4Q0D2K0 466 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 HSPA14Q0VDF9 509 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SLC36A3Q495N2 470 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 OR2W6PQ8NHA6 318 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 IDI2Q9BXS1 227 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 GAREM1Q9H706 876 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PATZ1Q9HBE1 687 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ZBTB26Q9HCK0 441 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TOPAZ1Q8N9V7 1692 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PARP14Q460N5 1801 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MATN4O95460 622 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 LARGE1O95461 756 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PRNPP04156 253 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TP53P04637 393 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 NUDT7P0C024 238 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 GRK6P43250 576 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PPT1P50897 306 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TAS2R50P59544 299 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PFKPQ01813 784 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ATG9BQ674R7 924 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 NUDT13Q86X67 352 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZSWIM9Q86XI8 627 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SLC34A3Q8N130 599 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PTGR2Q8N8N7 351 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 LRRC46Q96FV0 321 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TMEM39AQ9NV64 488 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 HSPB11Q9Y547 144 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ATMINO43313 823 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SULT1C4O75897 302 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 OSTNP61366 133 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 LRRC66Q68CR7 880 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 KCTD8Q6ZWB6 473 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SYT13Q7L8C5 426 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 OR4K3Q96R72 315 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SEC22CQ9BRL7 303 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ASPNQ9BXN1 380 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 VAPAQ9P0L0 249 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZFYVE26Q68DK2 2539 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PLXNA1Q9UIW2 1896 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 FAM25EA8MYX2 175 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 DCLK1O15075 740 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SSX4O60224 188 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 F10P00742 488 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TGFB1P01137 390 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 CHRNB2P17787 502 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ACTR1BP42025 376 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PPP3CAQ08209 521 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 OVGP1Q12889 678 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 KLF10Q13118 480 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 CAPSQ13938 189 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 HNRNPDQ14103 355 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 OTUD1Q5VV17 481 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ADGRG2Q8IZP9 1017 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 NANPQ8TBE9 248 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 GRIN3AQ8TCU5 1115 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 FCAMRQ8WWV6 532 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 FCRL2Q96LA5 508 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 AGO4Q9HCK5 861 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 GMPR2Q9P2T1 348 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 AXIN2Q9Y2T1 843 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 KIAA1551Q9HCM1 1747 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TRAV19A0A0A6YYK7 116 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 UNC119BA6NIH7 251 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 COL6A1P12109 1028 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TPT1P13693 172 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 RAB4AP20338 218 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 CPT2P23786 658 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 KCNJ5P48544 419 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 RARRES1P49788 294 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TOMM20Q15388 145 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 REEP3Q6NUK4 255 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 AHSA2Q719I0 299 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 VASH1Q7L8A9 365 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PMM1Q92871 262 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 BORCS7Q96B45 105 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PDP1Q9P0J1 537 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 UGT2A1Q9Y4X1 527 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SPO11Q9Y5K1 396 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SSC5DA1L4H1 1573 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TCP10L2B9ZVM9 353 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF30P17039 623 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 HLCSP50747 726 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 C4orf46Q504U0 113 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 NDUFAF5Q5TEU4 345 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 KIAA0319Q5VV43 1072 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms