RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 IPO13O94829 963 aaKnown RBP15.38■□□□□ 0.05
SNX17-204ENST00000453453 THEGLP0DJG4 465 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 NRF1Q16656 503 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 PYCR3Q53H96 274 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 MTX3Q5HYI7 312 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 HMBOX1Q6NT76 420 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 CYHR1Q6ZMK1 362 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 UBE2R2Q712K3 238 aaPredicted RBP15.38■□□□□ 0.05
SNX17-204ENST00000453453 DHFR2Q86XF0 187 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 CLVS1Q8IUQ0 354 aaPredicted RBP15.38■□□□□ 0.05
SNX17-204ENST00000453453 VRK3Q8IV63 474 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 FBXO39Q8N4B4 442 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 DTWD2Q8NBA8 298 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 OR13H1Q8NG92 308 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 TMIGD2Q96BF3 282 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 C12orf43Q96C57 262 aaKnown RBP15.38■□□□□ 0.05
SNX17-204ENST00000453453 DPEP2Q9H4A9 486 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 CCM2LQ9NUG4 571 aaPredicted RBP15.38■□□□□ 0.05
SNX17-204ENST00000453453 IKZF3Q9UKT9 509 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 ACSL5Q9ULC5 683 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 OARD1Q9Y530 152 aa15.38■□□□□ 0.05
SNX17-204ENST00000453453 CACNA1IQ9P0X4 2223 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 STX16-NPEPL1H3BU86 382 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 PSMD12O00232 456 aaPredicted RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 CATP04040 527 aaKnown RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 HIST1H2AGP0C0S8 130 aaPredicted RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 ACP5P13686 325 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 HIST1H2ADP20671 130 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 BCKDHBP21953 392 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 MAP4P27816 1152 aaKnown RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 ENTPD1P49961 510 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 RACK1P63244 317 aaKnown RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 NFKB2Q00653 900 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 DMPKQ09013 629 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 FASTKQ14296 549 aaKnown RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 NFE2L1Q14494 772 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 TGFBIQ15582 683 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 ZNF658BQ4V348 819 aaPredicted RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 C6orf10Q5SRN2 563 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 PAOXQ6QHF9 649 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 SBSNQ6UWP8 590 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 FBXL6Q8N531 539 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 PTGR2Q8N8N7 351 aaPredicted RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 PCYOX1LQ8NBM8 494 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 MCOLN3Q8TDD5 553 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 ASB11Q8WXH4 323 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 HIST1H2AHQ96KK5 128 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 SLC6A18Q96N87 628 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 HIST1H2AJQ99878 128 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 H2AFJQ9BTM1 129 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 TRMOQ9BU70 441 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 MIR1-1HGQ9H1L0 117 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 DUSP15Q9H1R2 295 aaPredicted RBP15.37■□□□□ 0.05
SNX17-204ENST00000453453 RDH14Q9HBH5 336 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 FBXO4Q9UKT5 387 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 SNX13Q9Y5W8 968 aa15.37■□□□□ 0.05
SNX17-204ENST00000453453 ANKRD12Q6UB98 2062 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 MRASO14807 208 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 SLC35G4P0C7Q5 338 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 TDGF1P13385 188 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 CD38P28907 300 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 KCNC1P48547 511 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 SRP54P61011 504 aaKnown RBP15.36■□□□□ 0.05
SNX17-204ENST00000453453 KCNC4Q03721 635 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 FOXM1Q08050 763 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 ABRQ12979 859 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 C16orf72Q14CZ0 275 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 MOGQ16653 247 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 PFKFB4Q16877 469 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 TMEM198Q66K66 360 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 TTC33Q6PID6 262 aaPredicted RBP15.36■□□□□ 0.05
SNX17-204ENST00000453453 GK5Q6ZS86 529 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 IQCHQ86VS3 1027 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 TMEFF1Q8IYR6 380 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 RGL4Q8IZJ4 473 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 LILRA3Q8N6C8 439 aaPredicted RBP15.36■□□□□ 0.05
SNX17-204ENST00000453453 TMEM105Q8N8V8 129 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 FAM47BQ8NA70 645 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 GIPC3Q8TF64 312 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 OR1E3Q8WZA6 343 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 PHF21BQ96EK2 531 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 SLC29A1Q99808 456 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 EGFL8Q99944 293 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 HOPXQ9BPY8 73 aaPredicted RBP15.36■□□□□ 0.05
SNX17-204ENST00000453453 ORAI3Q9BRQ5 295 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 SLC12A9Q9BXP2 914 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 OSGEPL1Q9H4B0 414 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 PARVBQ9HBI1 364 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 SLC23A2Q9UGH3 650 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 PCYT1BQ9Y5K3 369 aaPredicted RBP15.36■□□□□ 0.05
SNX17-204ENST00000453453 THADAQ6YHU6 1953 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 LRP4O75096 1905 aa15.36■□□□□ 0.05
SNX17-204ENST00000453453 NEMP2A6NFY4 417 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 NCF1BA6NI72 391 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 NCF1CA8MVU1 366 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 IFRD1O00458 451 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 UBDO15205 165 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 FFAR2O15552 330 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 NRP2O60462 931 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms