RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 NME7Q9Y5B8 376 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.18□□□□□ -1.1
HCG18-238ENST00000449544 ICE1Q9Y2F5 2266 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 A0A0A6YYC8 382 aaPredicted RBP8.18□□□□□ -1.1
HCG18-238ENST00000449544 I3L1I5 382 aaPredicted RBP8.18□□□□□ -1.1
HCG18-238ENST00000449544 OR1I1O60431 355 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 PRDX3P30048 256 aaKnown RBP8.18□□□□□ -1.1
HCG18-238ENST00000449544 HOXA6P31267 233 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 HNMTP50135 292 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 MNAT1P51948 309 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 METAP1P53582 386 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 NUP107P57740 925 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 BIKQ13323 160 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 HEPACAMQ14CZ8 416 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 GPR19Q15760 415 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 PDSS1Q5T2R2 415 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 IYDQ6PHW0 289 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 RFLNAQ6ZTI6 216 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 NUDT13Q86X67 352 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 TMEM178AQ8NBL3 297 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 KHSRPQ92945 711 aaKnown RBP eCLIP8.18□□□□□ -1.11e-15■■■■■ 30.6
HCG18-238ENST00000449544 THOC1Q96FV9 657 aaKnown RBP8.18□□□□□ -1.1
HCG18-238ENST00000449544 FAM111AQ96PZ2 611 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 SMIM14Q96QK8 99 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
HCG18-238ENST00000449544 THUMPD3Q9BV44 507 aaKnown RBP8.18□□□□□ -1.1
HCG18-238ENST00000449544 RABEP2Q9H5N1 569 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 ERVMER34-1Q9H9K5 563 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 CD93Q9NPY3 652 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 PCDHGA4Q9Y5G9 962 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 ABCA4P78363 2273 aa8.18□□□□□ -1.1
HCG18-238ENST00000449544 HYKKA2RU49 373 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 PRRG2O14669 202 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 BANF1O75531 89 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 HAUS5O94927 633 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 FKBP9O95302 570 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 UMPSP11172 480 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 ALOX12P18054 663 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 SLC1A2P43004 574 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 EEF1A2Q05639 463 aaKnown RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 SCIMPQ6UWF3 145 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 FKBP9P1Q75LS8 142 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 R3HCC1LQ7Z5L2 792 aaKnown RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 PDZD3Q86UT5 571 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 NLRP14Q86W24 1093 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 PIH1D2Q8WWB5 315 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 RSC1A1Q92681 617 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 AGAP2Q99490 1192 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 CDC42EP4Q9H3Q1 356 aaKnown RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 CAB39LQ9H9S4 337 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 SDHAF3Q9NRP4 125 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 SEMA3GQ9NS98 782 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 STARD5Q9NSY2 213 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 SPATA7Q9P0W8 599 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 USP36Q9P275 1121 aaKnown RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 SAP18O00422 153 aaKnown RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 SRPX2O60687 465 aaPredicted RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 RFPL1O75677 317 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 F10P00742 488 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 ITGA2BP08514 1039 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 ATP5A1P25705 553 aaKnown RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 GRIA1P42261 906 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 ID2Q02363 134 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 NKAIN1Q4KMZ8 207 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 PYCR3Q53H96 274 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 AFMIDQ63HM1 303 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 CNTD1Q8N815 330 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 PRR7Q8TB68 274 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 PPCDCQ96CD2 204 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 MOCOSQ96EN8 888 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 NUDT4Q9NZJ9 180 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 VTI1BQ9UEU0 232 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 DKKL1Q9UK85 242 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 OTOGLQ3ZCN5 2332 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 C15orf38-AP3S2A0A0A6YYH1 394 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 AREL1O15033 823 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 PIAS1O75925 651 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 PYGBP11216 843 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 GDF10P55107 478 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 CTBP2P56545 445 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 CLDN6P56747 220 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 MEF2AQ02078 507 aaPredicted RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 C2orf80Q0P641 193 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 IFNEQ86WN2 208 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 CRIPAKQ8N1N5 446 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 C7orf57Q8NEG2 295 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 DNASE2BQ8WZ79 361 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 RELTQ969Z4 430 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 CMTM7Q96FZ5 175 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 SERPINI1Q99574 410 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 REXO4Q9GZR2 422 aaKnown RBP8.17□□□□□ -1.1
HCG18-238ENST00000449544 SLC24A2Q9UI40 661 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 POU2F3Q9UKI9 436 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 TCRBV7S2A1N4TA0A589 114 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 TRPC5OSA6NMA1 111 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 D6RAR5 112 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 AGPSO00116 658 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 ZNF749O43361 778 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 TRIM13O60858 407 aa8.17□□□□□ -1.1
HCG18-238ENST00000449544 CTSLP07711 333 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms