RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MAGEB10Q96LZ2 347 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 PHOX2BQ99453 314 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 ACTR8Q9H981 624 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 PELI2Q9HAT8 420 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 MRPS30Q9NP92 439 aaKnown RBP13.54□□□□□ -0.24
SHMT2-203ENST00000449049 EPHA6Q9UF33 1036 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 ZDHHC2Q9UIJ5 367 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 POMT2Q9UKY4 750 aa13.54□□□□□ -0.24
SHMT2-203ENST00000449049 LAMA1P25391 3075 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 DMDP11532 3685 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 KCNE1BA0A087WTH5 132 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 IGKV1-8A0A0C4DH67 115 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 CPED1A4D0V7 1026 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 SRRM3A6NNA2 597 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-203ENST00000449049 C4orf47A7E2U8 309 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 ZW10O43264 779 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 OR4F21O95013 312 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 C1GALT1C1LP0DN25 315 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 RPL14P50914 215 aaKnown RBP13.53□□□□□ -0.24
SHMT2-203ENST00000449049 IRF8Q02556 426 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 DOC2AQ14183 400 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 XKR6Q5GH73 641 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 SH2D4BQ5SQS7 431 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 CATSPEREQ5SY80 951 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 KIAA1614Q5VZ46 1190 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 ASCL5Q7RTU5 278 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 CRLF3Q8IUI8 442 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 IFI44Q8TCB0 444 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 PTCD3Q96EY7 689 aaKnown RBP13.53□□□□□ -0.24
SHMT2-203ENST00000449049 CCDC3Q9BQI4 270 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 ABCG4Q9H172 646 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 SLC6A20Q9NP91 592 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 CUEDC1Q9NWM3 386 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-203ENST00000449049 FTSJ1Q9UET6 329 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 RNF11Q9Y3C5 154 aa13.53□□□□□ -0.24
SHMT2-203ENST00000449049 GMNCA6NCL1 334 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 DUX1O43812 170 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 SH3BP5O60239 455 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 CBFA2T3O75081 653 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 ENO1P06733 434 aaKnown RBP13.52□□□□□ -0.24
SHMT2-203ENST00000449049 JUPP14923 745 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 CKMT2P17540 419 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 CD22P20273 847 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 ACP1P24666 158 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 HRH2P25021 359 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 CD1CP29017 333 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 ARL1P40616 181 aaPredicted RBP13.52□□□□□ -0.24
SHMT2-203ENST00000449049 SEC24CP53992 1094 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 PPP1CAP62136 330 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 SQSTM1Q13501 440 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 NKAIN2Q5VXU1 208 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 KANK2Q63ZY3 851 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 GRHL2Q6ISB3 625 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 FAM129CQ86XR2 697 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 FAM20CQ8IXL6 584 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 CHCHD4Q8N4Q1 142 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 Q8N9G6 341 aaPredicted RBP13.52□□□□□ -0.24
SHMT2-203ENST00000449049 OR4K1Q8NGD4 311 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 PIWIL2Q8TC59 973 aaKnown RBP13.52□□□□□ -0.24
SHMT2-203ENST00000449049 AHCYL2Q96HN2 611 aaKnown RBP13.52□□□□□ -0.24
SHMT2-203ENST00000449049 PNPOQ9NVS9 261 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 TRAF6Q9Y4K3 522 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 KLK4Q9Y5K2 254 aa13.52□□□□□ -0.24
SHMT2-203ENST00000449049 KNL1Q8NG31 2342 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 A0A0J9YY10 115 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 AZIN1O14977 448 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 GDF9O60383 454 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 HGFP14210 728 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 VARSP26640 1264 aaKnown RBP13.52□□□□□ -0.25
SHMT2-203ENST00000449049 HNF4AP41235 474 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 LSSP48449 732 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 CCR8P51685 355 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 FOXA1P55317 472 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 ZNF425Q6IV72 752 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 CLYBLQ8N0X4 340 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 CDYL2Q8N8U2 506 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 AGR3Q8TD06 166 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 KCNA7Q96RP8 456 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 EFCAB11Q9BUY7 163 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 SLC29A3Q9BZD2 475 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 TMEM184CQ9NVA4 438 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 ANKMY1Q9P2S6 941 aa13.52□□□□□ -0.25
SHMT2-203ENST00000449049 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-203ENST00000449049 CACNA1HO95180 2353 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 TMEM233B4DJY2 109 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 TNFSF14O43557 240 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 TGDSO95455 350 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 CAPN1P07384 714 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 UROSP10746 265 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 CSF2RBP32927 897 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 GRIA3P42263 894 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 HK2P52789 917 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 CSNK1G2P78368 415 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 CFHR1Q03591 330 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 LAPTM5Q13571 262 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 NAA25Q14CX7 972 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 CLEC6AQ6EIG7 209 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 WDR74Q6RFH5 385 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-203ENST00000449049 TRIM73Q86UV7 250 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms