RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 DHRS4Q9BTZ2 278 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 SYNPO2LQ9H987 977 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 CUTCQ9NTM9 273 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 IFT80Q9P2H3 777 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 ANKMY1Q9P2S6 941 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 NDOR1Q9UHB4 597 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 GPN3Q9UHW5 284 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 PCSK5Q92824 1860 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 PIEZO2Q9H5I5 2752 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 A0A1B0GX78 115 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 TCRBV9S1A1TA0A576 114 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 HYKKA2RU49 373 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 H0YGG7 62 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 H7BY64 318 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 CNOT3O75175 753 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 CCNDBP1O95273 360 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 MED26O95402 600 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 ONECUT2O95948 504 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 EIF2S1P05198 315 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 PMS2P54278 862 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 TAS2R39P59534 338 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 GPX6P59796 221 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 ARF3P61204 181 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 ABATP80404 500 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 RELAQ04206 551 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 WHAMMP3Q1A5X7 153 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 ZXDCQ2QGD7 858 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 FAM214AQ32MH5 1076 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 MRPL14Q6P1L8 145 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 CYS1Q717R9 158 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 APLFQ8IW19 511 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 CEP97Q8IW35 865 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 DTWD1Q8N5C7 304 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 C9orf43Q8TAL5 461 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 PRAP1Q96NZ9 151 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 OR2A5Q96R48 311 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 C17orf62Q9BQA9 187 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 TRIM55Q9BYV6 548 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 ATG10Q9H0Y0 220 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 RHOJQ9H4E5 214 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 CCDC177Q9NQR7 707 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 ZNF71Q9NQZ8 489 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 CUEDC1Q9NWM3 386 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 NSMCE4AQ9NXX6 385 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 TLK1Q9UKI8 766 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 IKZF3Q9UKT9 509 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 PADI2Q9Y2J8 665 aa12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 PTRH2Q9Y3E5 179 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 TNRC6AQ8NDV7 1962 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-203ENST00000448428 ESYT3A0FGR9 886 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 ARGFXA6NJG6 315 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 K7EM74 188 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 DNAJB5O75953 348 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 C1QAP02745 245 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 CD63P08962 238 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 GSTA2P09210 222 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 HIST1H2AGP0C0S8 130 aaPredicted RBP12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 ZNF37AP17032 561 aaPredicted RBP12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 HIST1H2ADP20671 130 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 MAGEA4P43358 317 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 OR1D4P47884 311 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 FOXL2P58012 376 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 TBPL1P62380 186 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 CHAF1BQ13112 559 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 NAE1Q13564 534 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 ZNF460Q14592 562 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 SSPNQ14714 243 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 PRTGQ2VWP7 1150 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 C8orf74Q6P047 294 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 OVCH1Q7RTY7 1134 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 CCDC25Q86WR0 208 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 PLD3Q8IV08 490 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 METTL27Q8N6F8 245 aaPredicted RBP12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 ALKBH8Q96BT7 664 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 PTERQ96BW5 349 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 VPS39Q96JC1 886 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 HIST1H2AHQ96KK5 128 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 HIST1H2AJQ99878 128 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 H2AFJQ9BTM1 129 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 TRIM54Q9BYV2 358 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 PHACTR1Q9C0D0 580 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 PCBD2Q9H0N5 130 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 LRRC4CQ9HCJ2 640 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 TMEM184CQ9NVA4 438 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 ARL15Q9NXU5 204 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 UTP6Q9NYH9 597 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 SH2B3Q9UQQ2 575 aa12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 MTO1Q9Y2Z2 717 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-203ENST00000448428 FAM159BA6NKW6 160 aa12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 HAT1O14929 419 aa12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 RFPL1O75677 317 aa12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 PIM1P11309 404 aaPredicted RBP12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 PLA2G2AP14555 144 aa12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 EZRP15311 586 aaKnown RBP12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 NPPBP16860 134 aa12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 OTX2P32243 289 aa12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 FOLR3P41439 243 aa12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 CCL11P51671 97 aa12.16□□□□□ -0.46
PRPF40A-203ENST00000448428 GUCY2DQ02846 1103 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms