RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 CSTF3Q12996 717 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 BTN1A1Q13410 526 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 KCTD2Q14681 263 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 PTGR1Q14914 329 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 GRIK4Q16099 956 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 RFTN2Q52LD8 501 aaPredicted RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 LCN1P1Q5VSP4 162 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ANKRD54Q6NXT1 300 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 C19orf18Q8NEA5 215 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 POP5Q969H6 163 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 KIAA1191Q96A73 305 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 TBC1D20Q96BZ9 403 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 WDFY2Q96P53 400 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ABCB9Q9NP78 766 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 WASH6PQ9NQA3 447 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 SIRT5Q9NXA8 310 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF70Q9UC06 446 aaPredicted RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 AUP1Q9Y679 476 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM240BA0A1B0GVZ2 78 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM220BPB1ANY3 271 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 GFRA2O00451 464 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 HTR6P50406 440 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 MXD1Q05195 221 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 WSCD2Q2TBF2 565 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 KLHL12Q53G59 568 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 TOR1AIP1Q5JTV8 583 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 SPANXN4Q5MJ08 99 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF648Q5T619 568 aaPredicted RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ATG9BQ674R7 924 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 NADSYN1Q6IA69 706 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ANKRD53Q8N9V6 530 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 TTLQ8NG68 377 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 FBXW5Q969U6 566 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 MARC2Q969Z3 335 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 AP2M1Q96CW1 435 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF419Q96HQ0 510 aaPredicted RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM167AQ96KS9 214 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 QRFPRQ96P65 431 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 FERD3LQ96RJ6 166 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 THUMPD1Q9NXG2 353 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 NLKQ9UBE8 527 aa9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 DNMT3AQ9Y6K1 912 aaPredicted RBP9.16□□□□□ -0.94
SYNPO2-204ENST00000448416 HLA-DQB2P05538 268 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 PGRP06401 933 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 HOXD4P09016 255 aaPredicted RBP9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 CLEC2LP0C7M8 214 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC2A3P11169 496 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 ATF6P18850 670 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 SSTR4P31391 388 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 CBX5P45973 191 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 RGMBQ6NW40 437 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 KDELC1Q6UW63 502 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM217AQ8IXS0 508 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF431Q8TF32 576 aaPredicted RBP9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 MTERF3Q96E29 417 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 DPY30Q9C005 99 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 SCPEP1Q9HB40 452 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 PCTPQ9UKL6 214 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 LRRC37AA6NMS7 1700 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC35F4A4IF30 521 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 UBA1P22314 1058 aaKnown RBP9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 EVI2BP34910 448 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 GGT2P36268 569 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 RPL38P63173 70 aaKnown RBP9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 SCAPQ12770 1279 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 RIN1Q13671 783 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 GLYR1Q49A26 553 aaPredicted RBP9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 MLIPQ5VWP3 458 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 MZT2BQ6NZ67 158 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 ATCAYQ86WG3 371 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 C10orf111Q8N326 155 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC37A3Q8NCC5 494 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 PHF21AQ96BD5 680 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF578Q96N58 590 aaPredicted RBP9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 OR52E6Q96RD3 313 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 MFSD1Q9H3U5 465 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 WDCPQ9H6R7 721 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 CATSPERBQ9H7T0 1116 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM50BQ9Y247 325 aa9.15□□□□□ -0.94
SYNPO2-204ENST00000448416 KLRG2A4D1S0 409 aaPredicted RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 CDC7O00311 574 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 STX16O14662 325 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 TXNP10599 105 aaKnown RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 HMGCLP35914 325 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 VLDLRP98155 873 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 KIAA0040Q15053 153 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 EIF4HQ15056 248 aaKnown RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 GRK1Q15835 563 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 EFCAB12Q6NXP0 572 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 TMEM81Q6P7N7 255 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 PAQR3Q6TCH7 311 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 ZZZ3Q8IYH5 903 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 LINC00518Q8N0U6 118 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 C2orf69Q8N8R5 385 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 OR52B6Q8NGF0 335 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 C9orf43Q8TAL5 461 aaPredicted RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 UTP15Q8TED0 518 aaKnown RBP9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 RIT1Q92963 219 aa9.15□□□□□ -0.95
SYNPO2-204ENST00000448416 SENP8Q96LD8 212 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms