RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ZBTB20Q9HC78 741 aaPredicted RBP19.81■□□□□ 0.76
SDC1-205ENST00000447124 ATP13A2Q9NQ11 1180 aa19.81■□□□□ 0.76
SDC1-205ENST00000447124 TAC3Q9UHF0 121 aa19.81■□□□□ 0.76
SDC1-205ENST00000447124 G3BP2Q9UN86 482 aaKnown RBP19.81■□□□□ 0.76
SDC1-205ENST00000447124 HS3ST3B1Q9Y662 390 aa19.81■□□□□ 0.76
SDC1-205ENST00000447124 GOLGA6L10A0A0M3HER8 536 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 ALOX12BO75342 701 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 IGHEP01854 428 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 ERVK-10P10266 1014 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 GNLYP22749 145 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 HSD17B2P37059 387 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 ICE2Q659A1 982 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 PIWIL4Q7Z3Z4 852 aaKnown RBP19.8■□□□□ 0.76
SDC1-205ENST00000447124 KCNMB4Q86W47 210 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 HPS6Q86YV9 775 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 CLEC1AQ8NC01 280 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 CALML6Q8TD86 181 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 PNPLA2Q96AD5 504 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 NACC2Q96BF6 587 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 OR2A5Q96R48 311 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 CCDC68Q9H2F9 335 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 PLAC1Q9HBJ0 212 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 ZNF304Q9HCX3 659 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 ANKMY1Q9P2S6 941 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 CDC23Q9UJX2 597 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 FBXL4Q9UKA2 621 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 DOCK10Q96BY6 2186 aa19.8■□□□□ 0.76
SDC1-205ENST00000447124 ESPL1Q14674 2120 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 USP27XA6NNY8 438 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 SYF2O95926 243 aaKnown RBP19.79■□□□□ 0.76
SDC1-205ENST00000447124 ENO3P13929 434 aaPredicted RBP19.79■□□□□ 0.76
SDC1-205ENST00000447124 PGAM1P18669 254 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 SKIV2L2P42285 1042 aaKnown RBP19.79■□□□□ 0.76
SDC1-205ENST00000447124 PTK6Q13882 451 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 CRYMQ14894 314 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 C2CD4AQ8NCU7 369 aaPredicted RBP19.79■□□□□ 0.76
SDC1-205ENST00000447124 GALNT11Q8NCW6 608 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 SLCO2A1Q92959 643 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 COL26A1Q96A83 441 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 PWWP2AQ96N64 755 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 NDNQ99608 321 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 EBNA1BP2Q99848 306 aaKnown RBP19.79■□□□□ 0.76
SDC1-205ENST00000447124 PCYOX1Q9UHG3 505 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 COMMD10Q9Y6G5 202 aa19.79■□□□□ 0.76
SDC1-205ENST00000447124 MDC1Q14676 2089 aaKnown RBP19.79■□□□□ 0.76
SDC1-205ENST00000447124 ZBTB14O43829 449 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 IMPA1P29218 277 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 SNRPNP63162 240 aaKnown RBP19.78■□□□□ 0.76
SDC1-205ENST00000447124 HKDC1Q2TB90 917 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 IGFL3Q6UXB1 125 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 ARHGEF39Q8N4T4 335 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 FAM26EQ8N5C1 309 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 EFCAB3Q8N7B9 438 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 STT3BQ8TCJ2 826 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 C19orf60Q96EN9 201 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 FAM167BQ9BTA0 163 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 SLAMF7Q9NQ25 335 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 ABCF3Q9NUQ8 709 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 ASIC3Q9UHC3 531 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 ADAMTS6Q9UKP5 1117 aa19.78■□□□□ 0.76
SDC1-205ENST00000447124 RUVBL1Q9Y265 456 aaKnown RBP19.78■□□□□ 0.76
SDC1-205ENST00000447124 USP9YO00507 2555 aaPredicted RBP19.77■□□□□ 0.76
SDC1-205ENST00000447124 SMAPO00193 183 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 VPS4BO75351 444 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 AHSGP02765 367 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 EMP3P54852 163 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 KLC1Q07866 573 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 AIMP2Q13155 320 aaKnown RBP19.77■□□□□ 0.76
SDC1-205ENST00000447124 NAA25Q14CX7 972 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 MUM1Q2TAK8 710 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 VWA2Q5GFL6 755 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 RBM20Q5T481 1227 aaKnown RBP19.77■□□□□ 0.76
SDC1-205ENST00000447124 PRMT9Q6P2P2 845 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 UBE2R2Q712K3 238 aaPredicted RBP19.77■□□□□ 0.76
SDC1-205ENST00000447124 LAPTM4BQ86VI4 370 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 CREG2Q8IUH2 290 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 PLD3Q8IV08 490 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 PRSS58Q8IYP2 241 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 CSNK1A1LQ8N752 337 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 EEF1AKMT1Q8WVE0 214 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 CUEDC1Q9NWM3 386 aaPredicted RBP19.77■□□□□ 0.76
SDC1-205ENST00000447124 SLC17A6Q9P2U8 582 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 NXT1Q9UKK6 140 aaKnown RBP19.77■□□□□ 0.76
SDC1-205ENST00000447124 VPS4AQ9UN37 437 aa19.77■□□□□ 0.76
SDC1-205ENST00000447124 IGLV3-12A0A075B6K2 115 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 ZNF839A8K0R7 811 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 H7BY64 318 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 FFAR3O14843 346 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 GPR42O15529 346 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 FOXS1O43638 330 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 VPS26AO75436 327 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 ZGLP1P0C6A0 271 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 TCP1P17987 556 aaKnown RBP19.76■□□□□ 0.75
SDC1-205ENST00000447124 CARSP49589 748 aaKnown RBP19.76■□□□□ 0.75
SDC1-205ENST00000447124 CDKN2DP55273 166 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 ABATP80404 500 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 RELAQ04206 551 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 Q0VFX4 171 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 BBS9Q3SYG4 887 aa19.76■□□□□ 0.75
SDC1-205ENST00000447124 CRB2Q5IJ48 1285 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms