RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 STATHP02808 62 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 CATP04040 527 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 CMPK1P30085 196 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ELK3P41970 407 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 SKIV2L2P42285 1042 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 CARSP49589 748 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 EFNA3P52797 238 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ITGA8P53708 1063 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ARSFP54793 590 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ARF3P61204 181 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ETF1P62495 437 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 DR1Q01658 176 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 GRM7Q14831 915 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 HKDC1Q2TB90 917 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 PRTGQ2VWP7 1150 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ZC3H12BQ5HYM0 836 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 TCTE1Q5JU00 501 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 SPANXN3Q5MJ09 141 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 DCAF10Q5QP82 559 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 TEDDM1Q5T9Z0 273 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ICE2Q659A1 982 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 STEAP4Q687X5 459 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 HIBCHQ6NVY1 386 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 PAQR3Q6TCH7 311 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 UBE2R2Q712K3 238 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 MED25Q71SY5 747 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 OVCH1Q7RTY7 1134 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 RAB43Q86YS6 212 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 CNTN4Q8IWV2 1026 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 C17orf53Q8N3J3 647 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 RBMXL3Q8N7X1 1067 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 TMEM102Q8N9M5 508 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 Q8NA96 180 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 GABPB2Q8TAK5 448 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 CALML6Q8TD86 181 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 MAGEC3Q8TD91 643 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 SMPDL3AQ92484 453 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 CERS2Q96G23 380 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 CFAP36Q96G28 342 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 OLFM1Q99784 485 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ZFYVE21Q9BQ24 234 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 FAM167BQ9BTA0 163 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 TRIM31Q9BZY9 425 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 CCDC68Q9H2F9 335 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 SOX17Q9H6I2 414 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 ZBTB20Q9HC78 741 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 MRPS30Q9NP92 439 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 KLHL42Q9P2K6 505 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 IKZF3Q9UKT9 509 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 PDE10AQ9Y233 779 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 RUVBL1Q9Y265 456 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 PADI2Q9Y2J8 665 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 MRPS2Q9Y399 296 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 MRFAP1Q9Y605 127 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 PSAT1Q9Y617 370 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 HS3ST3B1Q9Y662 390 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 TEX264Q9Y6I9 313 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 FLNBO75369 2602 aaKnown RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 ZGRF1Q86YA3 2104 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 HIVEP3Q5T1R4 2406 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 HYKKA2RU49 373 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 VSTM2BA6NLU5 285 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 SEC31AO94979 1220 aaKnown RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 EIF2S1P05198 315 aaKnown RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 RPA3P35244 121 aaPredicted RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 RPL21P46778 160 aaKnown RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 UQCRFS1P47985 274 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 PRDX1Q06830 199 aaKnown RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 ARHGAP19Q14CB8 494 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 MORF4L2Q15014 288 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 PHKG1Q16816 387 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 TTLL9Q3SXZ7 439 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 LAPTM4BQ86VI4 370 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 ANKMY2Q8IV38 441 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 RAB42Q8N4Z0 105 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 TTC29Q8NA56 475 aaPredicted RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 FKBP10Q96AY3 582 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 PTERQ96BW5 349 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 OR2A5Q96R48 311 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 SMAD5Q99717 465 aaKnown RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 NAT9Q9BTE0 207 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 SLC26A1Q9H2B4 701 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 FAM114A2Q9NRY5 505 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 TRMT6Q9UJA5 497 aaKnown RBP10.37□□□□□ -0.75
SF3A1-203ENST00000444440 CSAG2Q9Y5P2 127 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 COMMD10Q9Y6G5 202 aa10.37□□□□□ -0.75
SF3A1-203ENST00000444440 HECTD1Q9ULT8 2610 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 CLEC18AA5D8T8 446 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 FOXS1O43638 330 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 SRPX2O60687 465 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-203ENST00000444440 VPS26AO75436 327 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 PIAS1O75925 651 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 ENO3P13929 434 aaPredicted RBP10.36□□□□□ -0.75
SF3A1-203ENST00000444440 MMP11P24347 488 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 TBPL1P62380 186 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 Q0VFX4 171 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 SYT16Q17RD7 645 aa10.36□□□□□ -0.75
SF3A1-203ENST00000444440 VWA2Q5GFL6 755 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms