RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 HIST1H2ACQ93077 130 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 SCN3BQ9NY72 215 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 KIR2DS5A0A0G2JLQ3 304 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 A0A0G2JNG1 304 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 PRSS38A1L453 326 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 KIR2DS3K7RE56 304 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 KLK1P06870 262 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 TRPC1P48995 793 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 TPMTP51580 245 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 CDKN2DP55273 166 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 KIR2DS5Q14953 304 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 NIPAL1Q6NVV3 410 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 LIMS2Q7Z4I7 341 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 GATAD2AQ86YP4 633 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 PIANPQ8IYJ0 282 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 PNPT1Q8TCS8 783 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 FAM210AQ96ND0 272 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 REEP1Q9H902 201 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 LTB4R2Q9NPC1 389 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 ANAPC2Q9UJX6 822 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 MYO18AQ92614 2054 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 A8MUA0 341 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 CHURC1-FNTBB4DL54 471 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 MANBAO00462 879 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 B4GALT2O60909 372 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 C1GALT1C1LP0DN25 315 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 FNTBP49356 437 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 TBPL1P62380 186 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 ERVK-8P63133 956 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 MEF2AQ02078 507 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 Q6ZNB5 142 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 DDHD1Q8NEL9 900 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 ADAMTS19Q8TE59 1207 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 FATE1Q969F0 183 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 PALMDQ9NP74 551 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 PRDM8Q9NQV8 689 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 HCN3Q9P1Z3 774 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 RNF11Q9Y3C5 154 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 AGPSO00116 658 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 SLC7A2P52569 658 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 PSMD4P55036 377 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 TFF2Q03403 129 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 TRIM61Q5EBN2 209 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 MANEALQ5VSG8 457 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 PLD6Q8N2A8 252 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 DENND6BQ8NEG7 585 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 NAT6Q93015 286 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 DUSP26Q9BV47 211 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 REXO4Q9GZR2 422 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 RARRES3Q9UL19 164 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 AK4P27144 223 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 WDR4P57081 412 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 OC90Q02509 493 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ANKRD46Q86W74 232 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 PLD3Q8IV08 490 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 PLPP6Q8IY26 295 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ACVR1CQ8NER5 493 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ADCY4Q8NFM4 1077 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 DGAT2Q96PD7 388 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 OLFM1Q99784 485 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 C19orf25Q9UFG5 118 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 MAP4K5Q9Y4K4 846 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 KRT87PA6NCN2 255 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 C9JVG2 144 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 C1SP09871 688 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 PRPS1L1P21108 318 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 RPS13P62277 151 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 CTBSQ01459 385 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 HKDC1Q2TB90 917 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 C10orf62Q5T681 223 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ZBTB49Q6ZSB9 765 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 GPR150Q8NGU9 434 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 WASF2Q9Y6W5 498 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 OR2B3O76000 313 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ATXN1LP0C7T5 689 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 MAGEA6P43360 314 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 SLC34A1Q06495 639 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 FAM174BQ3ZCQ3 159 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 OR2T12Q8NG77 320 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ZNF563Q8TA94 476 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 NPAS2Q99743 824 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 HOPXQ9BPY8 73 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 NMUR2Q9GZQ4 415 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 TSC22D4Q9Y3Q8 395 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ZNFX1Q9P2E3 1918 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 IL6P05231 212 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 EFNA1P20827 205 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 MMP12P39900 470 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 AGTR2P50052 363 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ASPGQ86U10 573 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 CEP97Q8IW35 865 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 RBM12BQ8IXT5 1001 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 MMABQ96EY8 250 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ENOPH1Q9UHY7 261 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 ZNF229Q9UJW7 825 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 INTS6Q9UL03 887 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 SBF1O95248 1867 aa13.67□□□□□ -0.22
SMARCA4-204ENST00000444061 OR52A4PA6NMU1 304 aa13.66□□□□□ -0.22
SMARCA4-204ENST00000444061 SCN2BO60939 215 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms