RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 LGALS12Q96DT0 336 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZFP42Q96MM3 310 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 MBOAT7Q96N66 472 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 MYOCQ99972 504 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RNF26Q9BY78 433 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 SPNS1Q9H2V7 528 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ADAMTS10Q9H324 1103 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NSUN3Q9H649 340 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 UCK1Q9HA47 277 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NECTIN3Q9NQS3 549 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FSCN3Q9NQT6 498 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 HSPBP1Q9NZL4 362 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 HCN3Q9P1Z3 774 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TJP2Q9UDY2 1190 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 DCDC2Q9UHG0 476 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ANAPC7Q9UJX3 599 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FBXO5Q9UKT4 447 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LIPT1Q9Y234 373 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CRYL1Q9Y2S2 319 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NRXN2Q9P2S2 1712 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ARFGEF1Q9Y6D6 1849 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 hCG_1807616A0A1W2PRN6 198 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAM221BA6H8Z2 402 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAM170BA6NMN3 283 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 HIDE1A8MVS5 230 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 WDR64B1ANS9 1081 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SLC28A1O00337 649 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LCE2BO14633 110 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PSMD3O43242 534 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 AIREO43918 545 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 BANF1O75531 89 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAM155BO75949 473 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ATG7O95352 703 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 APBB3O95704 486 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FADS2O95864 444 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 C1QBP02746 253 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 MPOP05164 745 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 KLK3P07288 261 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 RAC2P15153 192 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NFKB1P19838 968 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RAB4AP20338 218 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZP3P21754 424 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 IL1R2P27930 398 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CCR10P46092 362 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PIK3CGP48736 1102 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RNF144AP50876 292 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 DGKEP52429 567 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SLC7A2P52569 658 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PSPHP78330 225 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RHDQ02161 417 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 HSF2Q03933 536 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 INCA1Q0VD86 236 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CUL2Q13617 745 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RIN1Q13671 783 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CEACAM7Q14002 265 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TMEM44Q2T9K0 475 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SGO1Q5FBB7 561 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZMAT1Q5H9K5 638 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 EFHC2Q5JST6 749 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FNBP1LQ5T0N5 605 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAXCQ5TGI0 409 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TTC23Q5W5X9 447 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PSAPL1Q6NUJ1 521 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SWSAP1Q6NVH7 229 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LETMD1Q6P1Q0 360 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 GJB7Q6PEY0 223 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 USP51Q70EK9 711 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 USP45Q70EL2 814 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SLC9B2Q86UD5 537 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZNF227Q86WZ6 799 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CDKL3Q8IVW4 592 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 GPALPP1Q8IXQ4 340 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZFP82Q8N141 532 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PARP16Q8N5Y8 322 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 EMC1Q8N766 993 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PLD5Q8N7P1 536 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 OR2I1PQ8NGU4 316 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 OR5J2Q8NH18 312 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RP9Q8TA86 221 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 CEP76Q8TAP6 659 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FEZF2Q8TBJ5 459 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 BPIFB1Q8TDL5 484 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SLC22A17Q8WUG5 538 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CANT1Q8WVQ1 401 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LARP4BQ92615 738 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 CCDC126Q96EE4 140 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 GINS4Q9BRT9 223 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 C11orf84Q9BUA3 381 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 LHX5Q9H2C1 402 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 OR51M1Q9H341 326 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LDAHQ9H6V9 325 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 IL1RL2Q9HB29 575 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PNPOQ9NVS9 261 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 MED11Q9P086 117 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 AGO1Q9UL18 857 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 HCN2Q9UL51 889 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 MGAT4AQ9UM21 535 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PCDHB9Q9Y5E1 797 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PLCE1Q9P212 2302 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 A0A1B0GVM2 712 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms