RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 CCDC81Q6ZN84 652 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 C17orf64Q86WR6 236 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 KLHDC8AQ8IYD2 350 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 SPATA6LQ8N4H0 392 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 ZSCAN1Q8NBB4 408 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 STAG3L4Q8TBR4 150 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 SNRNP27Q8WVK2 155 aaKnown RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 MTBPQ96DY7 904 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 CLIP3Q96DZ5 547 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 EGFL8Q99944 293 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 ZFYVE21Q9BQ24 234 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 DPH2Q9BQC3 489 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 SELENOSQ9BQE4 189 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 CCDC77Q9BR77 488 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 SPRTNQ9H040 489 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 EPB41L4BQ9H329 900 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 LHX9Q9NQ69 397 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 ABCF3Q9NUQ8 709 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 IRAK4Q9NWZ3 460 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 SRPK3Q9UPE1 567 aa11.33□□□□□ -0.6
HSPG2-206ENST00000439717 ANKRD11Q6UB99 2663 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-206ENST00000439717 A0A0J9YVX5 310 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 LOC101059948A0A1B0GTJ6 334 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 FITM1A5D6W6 292 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 C21orf140B9A014 251 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 K7ENP7 123 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 MEN1O00255 615 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 IPO13O94829 963 aaKnown RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 KLHL2O95198 593 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 ALDOAP04075 364 aaKnown RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 SNRPAP09012 282 aaKnown RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 LIFP15018 202 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 NPPBP16860 134 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 TFEBP19484 476 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 RORAP35398 523 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 GGT5P36269 586 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 MAGEA12P43365 314 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 ARSFP54793 590 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 VSNL1P62760 191 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 DLG1Q12959 904 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 GRM7Q14831 915 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 OR4D1Q15615 310 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 ZXDCQ2QGD7 858 aaPredicted RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 PTCHD3Q3KNS1 767 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 PRAMEF17Q5VTA0 474 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 SULT1C3Q6IMI6 304 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 RHBDD2Q6NTF9 364 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 KLC3Q6P597 504 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 INO80CQ6PI98 192 aaPredicted RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 C19orf48Q6RUI8 117 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 ZNF517Q6ZMY9 492 aaPredicted RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 ISCA2Q86U28 154 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 VASH2Q86V25 355 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 DSELQ8IZU8 1212 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 CENPLQ8N0S6 344 aaPredicted RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 ZNF655Q8N720 491 aaPredicted RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 SLC38A9Q8NBW4 561 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 RHEBL1Q8TAI7 183 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 PROKR1Q8TCW9 393 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 ALKBH8Q96BT7 664 aaKnown RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 PTERQ96BW5 349 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 PYCR2Q96C36 320 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 RHBDF1Q96CC6 855 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 NDC1Q9BTX1 674 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 UNKQ9C0B0 810 aaKnown RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 PRORYQ9H606 182 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 GPN2Q9H9Y4 310 aaPredicted RBP11.32□□□□□ -0.6
HSPG2-206ENST00000439717 PPCSQ9HAB8 311 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 IGSF5Q9NSI5 407 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 PCMTD2Q9NV79 361 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 KCND3Q9UK17 655 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 CELSR3Q9NYQ7 3312 aa11.32□□□□□ -0.6
HSPG2-206ENST00000439717 KCNE1BA0A087WTH5 132 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 SYCE1LA8MT33 242 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 H7BY64 318 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 TERTO14746 1132 aaKnown RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 EFSO43281 561 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 KERAO60938 352 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 S100BP04271 92 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CTSBP07858 339 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 COL6A2P12110 1019 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 AGXTP21549 392 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 GCAP28676 217 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 DLSTP36957 453 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 GCGRP47871 477 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 SLC6A12P48065 614 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CCR8P51685 355 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 EMP3P54852 163 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 RPS15AP62244 130 aaKnown RBP11.31□□□□□ -0.6
HSPG2-206ENST00000439717 CXADRP78310 365 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 GPS2Q13227 327 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 ACAP2Q15057 778 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 FAM214AQ32MH5 1076 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 FRMPD2BQ6IN97 320 aa11.31□□□□□ -0.6
HSPG2-206ENST00000439717 TIFABQ6ZNK6 161 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms