RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SCRG1O75711 98 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 STK16O75716 305 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 STK17BO94768 372 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 STATHP02808 62 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 KRT4P19013 534 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 MAGEA12P43365 314 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 ITGA1P56199 1179 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 VSX2P58304 361 aaPredicted RBP13.98□□□□□ -0.17
SGCE-204ENST00000428696 MEF2AQ02078 507 aaPredicted RBP13.98□□□□□ -0.17
SGCE-204ENST00000428696 NAA25Q14CX7 972 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 C4orf33Q8N1A6 199 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 DNAJC22Q8N4W6 341 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 RHEBL1Q8TAI7 183 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 ACMSDQ8TDX5 336 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 ISL2Q96A47 359 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 ZNF501Q96CX3 271 aaPredicted RBP13.98□□□□□ -0.17
SGCE-204ENST00000428696 GPR78Q96P69 363 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 TEFMQ96QE5 360 aaKnown RBP13.98□□□□□ -0.17
SGCE-204ENST00000428696 OR4K3Q96R72 315 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 ATOH8Q96SQ7 321 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 SELENOSQ9BQE4 189 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 PLCD4Q9BRC7 762 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 ZPBPQ9BS86 351 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 ROPN1BQ9BZX4 212 aaPredicted RBP13.98□□□□□ -0.17
SGCE-204ENST00000428696 ROPN1Q9HAT0 212 aaPredicted RBP13.98□□□□□ -0.17
SGCE-204ENST00000428696 EURLQ9NYK6 297 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 NUDT4Q9NZJ9 180 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 XPR1Q9UBH6 696 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 RAXQ9Y2V3 346 aa13.98□□□□□ -0.17
SGCE-204ENST00000428696 TEX51A0A1B0GUA7 166 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 FEZF1A0PJY2 475 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CCDC151A5D8V7 595 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CDRT15L2A8MXV6 281 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 E7EQ34 232 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 COPEO14579 308 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 MAP2K7O14733 419 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CTSVO60911 334 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 H2AFYO75367 372 aaKnown RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 DXOO77932 396 aaKnown RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 FKBP9O95302 570 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 TIAF1O95411 115 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 SERPIND1P05546 499 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CTSBP07858 339 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 FGF5P12034 268 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 ZNF28P17035 718 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 ALAS2P22557 587 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 GRK3P35626 688 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 ARL1P40616 181 aaPredicted RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 AGTR2P50052 363 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CSRP3P50461 194 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CCR8P51685 355 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 PCBP4P57723 403 aaKnown RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 RBBP5Q15291 538 aaKnown RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 TGIF1Q15583 401 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CATSPEREQ5SY80 951 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CEP85LQ5SZL2 805 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 FBXO42Q6P3S6 717 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 LCTLQ6UWM7 567 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 TMPRSS11BQ86T26 416 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 BPHLQ86WA6 291 aaPredicted RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 SRRM1Q8IYB3 904 aaKnown RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 ZNF655Q8N720 491 aaPredicted RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 CCDC63Q8NA47 563 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 NEIL2Q969S2 332 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 RERGQ96A58 199 aaPredicted RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 CNTNAP3BQ96NU0 1288 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 MRPL57Q9BQC6 102 aaKnown RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 CNTNAP3Q9BZ76 1288 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 CD244Q9BZW8 370 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 TMEM184CQ9NVA4 438 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 DNAJC11Q9NVH1 559 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 TMEM216Q9P0N5 145 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 NDOR1Q9UHB4 597 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 DCDC2Q9UHG0 476 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 PTBP2Q9UKA9 531 aaKnown RBP13.97□□□□□ -0.17
SGCE-204ENST00000428696 PCDHGA7Q9Y5G6 932 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 PCDHGA3Q9Y5H0 932 aa13.97□□□□□ -0.17
SGCE-204ENST00000428696 FRYQ5TBA9 3013 aa13.96□□□□□ -0.17
SGCE-204ENST00000428696 CHD8Q9HCK8 2581 aa13.96□□□□□ -0.17
SGCE-204ENST00000428696 ANKRD12Q6UB98 2062 aa13.96□□□□□ -0.17
SGCE-204ENST00000428696 IGKV1-8A0A0C4DH67 115 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 STMND1H3BQB6 276 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 TK2O00142 265 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 HAT1O14929 419 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 RGS16O15492 202 aaPredicted RBP13.96□□□□□ -0.18
SGCE-204ENST00000428696 RRP8O43159 456 aaKnown RBP13.96□□□□□ -0.18
SGCE-204ENST00000428696 KLK10O43240 276 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 ZNF749O43361 778 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 CCNYL3P0C7X3 344 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 CCT5P48643 541 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 ZNF844Q08AG5 666 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 TECRLQ5HYJ1 363 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 CDKL4Q5MAI5 379 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 WASHC2DQ5SRD0 308 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 C1orf189Q5VU69 101 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 FRMPD2BQ6IN97 320 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 PAQR7Q86WK9 346 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 CNPY4Q8N129 248 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 RIBC1Q8N443 379 aaPredicted RBP13.96□□□□□ -0.18
SGCE-204ENST00000428696 IL22RA1Q8N6P7 574 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms