RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ABTB1Q969K4 478 aaPredicted RBP10.36□□□□□ -0.75
CUX1-205ENST00000425244 SCRN2Q96FV2 425 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 EGLN2Q96KS0 407 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 SLC29A3Q9BZD2 475 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 SUV39H2Q9H5I1 410 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 RDH14Q9HBH5 336 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 SLC22A14Q9Y267 594 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 MTCH2Q9Y6C9 303 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 MYO15AQ9UKN7 3530 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 SH3BGRLO75368 114 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 CREG1O75629 220 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 SCELO95171 688 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 ZNF682O95780 498 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 OR56A5P0C7T3 313 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 GDI1P31150 447 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 CDKN2CP42773 168 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 PHEXP78562 749 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 IL1RL1Q01638 556 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 PIGFQ07326 219 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 DDX39BQ13838 428 aaKnown RBP10.36□□□□□ -0.75
CUX1-205ENST00000425244 SPIDRQ14159 915 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 LAPTM4AQ15012 233 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 MEP1AQ16819 746 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 ZXDCQ2QGD7 858 aaPredicted RBP10.36□□□□□ -0.75
CUX1-205ENST00000425244 C22orf39Q6P5X5 142 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 ZNF773Q6PK81 442 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 DPY19L3Q6ZPD9 716 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 R3HCC1LQ7Z5L2 792 aaKnown RBP10.36□□□□□ -0.75
CUX1-205ENST00000425244 BPIFB6Q8NFQ5 453 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 OTUB2Q96DC9 234 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 HSPBAP1Q96EW2 488 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 APIPQ96GX9 242 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 KAT8Q9H7Z6 458 aaKnown RBP10.36□□□□□ -0.75
CUX1-205ENST00000425244 THG1LQ9NWX6 298 aaKnown RBP10.36□□□□□ -0.75
CUX1-205ENST00000425244 B4GALT6Q9UBX8 382 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 SNX6Q9UNH7 406 aa10.36□□□□□ -0.75
CUX1-205ENST00000425244 F5P12259 2224 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 TTC34A8MYJ7 566 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 PRSS23O95084 383 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 NFATC1O95644 943 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 POU2F2P09086 479 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 FCARP24071 287 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 LTBRP36941 435 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 EMP3P54852 163 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 NCCRP1Q6ZVX7 275 aaPredicted RBP10.35□□□□□ -0.75
CUX1-205ENST00000425244 IQCF2Q8IXL9 164 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 CBARPQ8N350 705 aaPredicted RBP10.35□□□□□ -0.75
CUX1-205ENST00000425244 TMEM132CQ8N3T6 1108 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 CHCHD4Q8N4Q1 142 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 BEND7Q8N7W2 519 aaPredicted RBP10.35□□□□□ -0.75
CUX1-205ENST00000425244 CHST14Q8NCH0 376 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 SCAMP4Q969E2 229 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 OSBPL6Q9BZF3 934 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 PAIP1Q9H074 479 aaKnown RBP10.35□□□□□ -0.75
CUX1-205ENST00000425244 FAM118AQ9NWS6 357 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 GPRC5BQ9NZH0 403 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 PPT2Q9UMR5 302 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 PCDHGA8Q9Y5G5 932 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 A0A0J9YVX5 310 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 C16orf96A6NNT2 1141 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 RFXANKO14593 260 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 C1QCP02747 245 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 LAMP2P13473 410 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 SDC1P18827 310 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 EFNA1P20827 205 aaPredicted RBP10.35□□□□□ -0.75
CUX1-205ENST00000425244 CD247P20963 164 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 SOX9P48436 509 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 CSNK1DP48730 415 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 KCNAB2Q13303 367 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 ZNF648Q5T619 568 aaPredicted RBP10.35□□□□□ -0.75
CUX1-205ENST00000425244 BROXQ5VW32 411 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 OR4F3Q6IEY1 312 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 NEK5Q6P3R8 708 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 DOK6Q6PKX4 331 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 TMEM184AQ6ZMB5 413 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 TMEM179BQ7Z7N9 219 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 GALNT10Q86SR1 603 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 EID3Q8N140 333 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 FRS2Q8WU20 508 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 NXPE3Q969Y0 559 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 ITCHQ96J02 903 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 LMLNQ96KR4 655 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 MBOAT4Q96T53 435 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 P2RY13Q9BPV8 354 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 CPPED1Q9BRF8 314 aaPredicted RBP10.35□□□□□ -0.75
CUX1-205ENST00000425244 AMBRA1Q9C0C7 1298 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 RMND5AQ9H871 391 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 BRD9Q9H8M2 597 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 DEC1Q9P2X7 70 aa10.35□□□□□ -0.75
CUX1-205ENST00000425244 TBC1D3BA6NDS4 549 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 WASH3PC4AMC7 463 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 PRRT4C9JH25 899 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 ERN1O75460 977 aaKnown RBP10.34□□□□□ -0.75
CUX1-205ENST00000425244 C1SP09871 688 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 CBSLP0DN79 551 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 HLA-EP13747 358 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 MATN1P21941 496 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 DCKP27707 260 aa10.34□□□□□ -0.75
CUX1-205ENST00000425244 MAP4P27816 1152 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms