RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 NCBP2P52298 156 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLCN4-203ENST00000421085 DUOXA1Q1HG43 343 aa12.06□□□□□ -0.48
CLCN4-203ENST00000421085 EIF5AL1Q6IS14 154 aaKnown RBP12.06□□□□□ -0.48
CLCN4-203ENST00000421085 LYARQ9NX58 379 aaKnown RBP12.06□□□□□ -0.48
CLCN4-203ENST00000421085 VPS29Q9UBQ0 182 aa12.06□□□□□ -0.48
CLCN4-203ENST00000421085 MRPS23Q9Y3D9 190 aaKnown RBP12.06□□□□□ -0.48
CLCN4-203ENST00000421085 KLRG2A4D1S0 409 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 ELOA3DA6NLF2 546 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 J3QLW9 94 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 FCER2P06734 321 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF19P17023 458 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 AHCYP23526 432 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 S100A10P60903 97 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 ELOA3BQ3SY89 546 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 MSANTD2Q6P1R3 559 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TMEM17Q86X19 198 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 COX18Q8N8Q8 333 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 ELOA3Q8NG57 546 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 OR2L2Q8NH16 312 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 CNIH3Q8TBE1 160 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 S100PBPQ96BU1 408 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 PYCR2Q96C36 320 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 CAMK1GQ96NX5 476 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 WRAP53Q9BUR4 548 aaKnown RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 NIFKQ9BYG3 293 aaKnown RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 C13orf42A0A1B0GVH6 325 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TYROBPO43914 113 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 PRKCHP24723 683 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 APLP1P51693 650 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 CLCNKBP51801 687 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 UAP1L1Q3KQV9 507 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 LRRC69Q6ZNQ3 347 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 SPPL2BQ8TCT7 592 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 CREB3L1Q96BA8 519 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TRIM36Q9NQ86 728 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 CYTH4Q9UIA0 394 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 ERVK-11Q9UQG0 969 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 COQ4Q9Y3A0 265 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 IGLV3-22A0A075B6J6 115 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TRBV23OR9-2A0A075B6M9 112 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 RP2O75695 350 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 SOX14O95416 240 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 CH25HO95992 272 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 PCCBP05166 539 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 G6PDP11413 515 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 CMPK1P30085 196 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TATDN1Q6P1N9 297 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 NFKBIDQ8NI38 313 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF675Q8TD23 568 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF471Q9BX82 626 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 MFSD1Q9H3U5 465 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 SPATA7Q9P0W8 599 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 YJEFN3A6XGL0 299 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 DDNO94850 711 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 RPL19P84098 196 aaKnown RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 CES5AQ6NT32 575 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TMEM220Q6QAJ8 160 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TIFABQ6ZNK6 161 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 PPTC7Q8NI37 304 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 FTHL17Q9BXU8 183 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TM9SF3Q9HD45 589 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 PAK1IP1Q9NWT1 392 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-203ENST00000421085 MS4A12Q9NXJ0 267 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 PCDHGB1Q9Y5G3 927 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 HLA-DQB2P05538 268 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 TACSTD2P09758 323 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 SPATA31D3P0C874 917 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 GSTM3P21266 225 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 SPATA31D4Q6ZUB0 917 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 ZCCHC10Q8TBK6 192 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 LMLNQ96KR4 655 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 DNAJC27Q9NZQ0 273 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 COL1A2P08123 1366 aa12.05□□□□□ -0.48
CLCN4-203ENST00000421085 H0YAE9 185 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 AXIN1O15169 862 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 VAMP1P23763 118 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ERP29P30040 261 aaKnown RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 FAM124AQ86V42 546 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 CMTR2Q8IYT2 770 aaKnown RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 RGL4Q8IZJ4 473 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 SCML4Q8N228 414 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 NDC1Q9BTX1 674 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 FAM124BQ9H5Z6 455 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 SLC2A6Q9UGQ3 507 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 TTC24A2A3L6 582 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 LRRC72A6NJI9 287 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 BCHEP06276 602 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 NKX2-5P52952 324 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 MOGSQ13724 837 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 SYVN1Q86TM6 617 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF516Q92618 1163 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 RELTQ969Z4 430 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 KCNA7Q96RP8 456 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 CYP2S1Q96SQ9 504 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 HTATIP2Q9BUP3 242 aa12.04□□□□□ -0.48
CLCN4-203ENST00000421085 RPP14O95059 124 aaKnown RBP12.04□□□□□ -0.48
CLCN4-203ENST00000421085 ARFRP1Q13795 201 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms