RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CCDC68Q9H2F9 335 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 SOX17Q9H6I2 414 aaPredicted RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 LRRC4CQ9HCJ2 640 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 ZNF304Q9HCX3 659 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 SLC6A20Q9NP91 592 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 MRPS30Q9NP92 439 aaKnown RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 FBXO6Q9NRD1 293 aaPredicted RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 FAM114A2Q9NRY5 505 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 SEMA3GQ9NS98 782 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 MAP10Q9P2G4 905 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 CTSFQ9UBX1 484 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 FBXL4Q9UKA2 621 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 B3GNT3Q9Y2A9 372 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 NEU2Q9Y3R4 380 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 HS3ST3B1Q9Y662 390 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 MAU2Q9Y6X3 613 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 ANKRD12Q6UB98 2062 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 FLNCQ14315 2725 aa9□□□□□ -0.97
NUP50-205ENST00000419387 H0YGG7 62 aa9□□□□□ -0.97
NUP50-205ENST00000419387 ZBTB14O43829 449 aa9□□□□□ -0.97
NUP50-205ENST00000419387 NRP2O60462 931 aa9□□□□□ -0.97
NUP50-205ENST00000419387 PHF2O75151 1096 aa9□□□□□ -0.97
NUP50-205ENST00000419387 VPS26AO75436 327 aa9□□□□□ -0.97
NUP50-205ENST00000419387 AGFG2O95081 481 aa9□□□□□ -0.97
NUP50-205ENST00000419387 MED26O95402 600 aa9□□□□□ -0.97
NUP50-205ENST00000419387 MPC1LP0DKB6 136 aa9□□□□□ -0.97
NUP50-205ENST00000419387 ERVK-10P10266 1014 aa9□□□□□ -0.97
NUP50-205ENST00000419387 MAGEA3P43357 314 aa9□□□□□ -0.97
NUP50-205ENST00000419387 CARSP49589 748 aaKnown RBP9□□□□□ -0.97
NUP50-205ENST00000419387 PNLIPRP1P54315 467 aa9□□□□□ -0.97
NUP50-205ENST00000419387 ARF3P61204 181 aaPredicted RBP9□□□□□ -0.97
NUP50-205ENST00000419387 ETF1P62495 437 aaKnown RBP9□□□□□ -0.97
NUP50-205ENST00000419387 OCA2Q04671 838 aa9□□□□□ -0.97
NUP50-205ENST00000419387 PRDX1Q06830 199 aaKnown RBP9□□□□□ -0.97
NUP50-205ENST00000419387 TSTA3Q13630 321 aaPredicted RBP9□□□□□ -0.97
NUP50-205ENST00000419387 RBBP7Q16576 425 aa9□□□□□ -0.97
NUP50-205ENST00000419387 LONRF1Q17RB8 773 aa9□□□□□ -0.97
NUP50-205ENST00000419387 MUM1Q2TAK8 710 aa9□□□□□ -0.97
NUP50-205ENST00000419387 EIF2S3LQ2VIR3 472 aaKnown RBP9□□□□□ -0.97
NUP50-205ENST00000419387 PRTGQ2VWP7 1150 aa9□□□□□ -0.97
NUP50-205ENST00000419387 TUBB8Q3ZCM7 444 aa9□□□□□ -0.97
NUP50-205ENST00000419387 ZNF549Q6P9A3 640 aa9□□□□□ -0.97
NUP50-205ENST00000419387 CYHR1Q6ZMK1 362 aa9□□□□□ -0.97
NUP50-205ENST00000419387 Q6ZS92 163 aa9□□□□□ -0.97
NUP50-205ENST00000419387 PARP9Q8IXQ6 854 aa9□□□□□ -0.97
NUP50-205ENST00000419387 DTWD1Q8N5C7 304 aa9□□□□□ -0.97
NUP50-205ENST00000419387 CISD2Q8N5K1 135 aaKnown RBP9□□□□□ -0.97
NUP50-205ENST00000419387 NAT8LQ8N9F0 302 aa9□□□□□ -0.97
NUP50-205ENST00000419387 FBXO15Q8NCQ5 510 aaPredicted RBP9□□□□□ -0.97
NUP50-205ENST00000419387 STT3BQ8TCJ2 826 aa9□□□□□ -0.97
NUP50-205ENST00000419387 CALML6Q8TD86 181 aa9□□□□□ -0.97
NUP50-205ENST00000419387 GRK7Q8WTQ7 553 aa9□□□□□ -0.97
NUP50-205ENST00000419387 ZNF480Q8WV37 535 aa9□□□□□ -0.97
NUP50-205ENST00000419387 ASB11Q8WXH4 323 aa9□□□□□ -0.97
NUP50-205ENST00000419387 KCNJ9Q92806 393 aa9□□□□□ -0.97
NUP50-205ENST00000419387 INPP5DQ92835 1189 aa9□□□□□ -0.97
NUP50-205ENST00000419387 MIEF2Q96C03 454 aa9□□□□□ -0.97
NUP50-205ENST00000419387 SNRNP40Q96DI7 357 aaKnown RBP9□□□□□ -0.97
NUP50-205ENST00000419387 SIGLEC10Q96LC7 697 aa9□□□□□ -0.97
NUP50-205ENST00000419387 ILKAPQ9H0C8 392 aaPredicted RBP9□□□□□ -0.97
NUP50-205ENST00000419387 ZBTB20Q9HC78 741 aaPredicted RBP9□□□□□ -0.97
NUP50-205ENST00000419387 C20orf96Q9NUD7 363 aaPredicted RBP9□□□□□ -0.97
NUP50-205ENST00000419387 UTP6Q9NYH9 597 aaKnown RBP9□□□□□ -0.97
NUP50-205ENST00000419387 STOX2Q9P2F5 926 aaPredicted RBP9□□□□□ -0.97
NUP50-205ENST00000419387 ZNF282Q9UDV7 671 aaPredicted RBP9□□□□□ -0.97
NUP50-205ENST00000419387 TAC3Q9UHF0 121 aa9□□□□□ -0.97
NUP50-205ENST00000419387 CDC14AQ9UNH5 594 aa9□□□□□ -0.97
NUP50-205ENST00000419387 MED16Q9Y2X0 877 aa9□□□□□ -0.97
NUP50-205ENST00000419387 DHRS7Q9Y394 339 aa9□□□□□ -0.97
NUP50-205ENST00000419387 MAD1L1Q9Y6D9 718 aa9□□□□□ -0.97
NUP50-205ENST00000419387 COMMD10Q9Y6G5 202 aa9□□□□□ -0.97
NUP50-205ENST00000419387 PTPN13Q12923 2485 aa9□□□□□ -0.97
NUP50-205ENST00000419387 IGLV3-12A0A075B6K2 115 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 IGKV1-8A0A0C4DH67 115 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 E7ENX8 843 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 GFYI3L273 518 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 PGRMC1O00264 195 aaKnown RBP8.99□□□□□ -0.97
NUP50-205ENST00000419387 ALOX12BO75342 701 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 HAUS5O94927 633 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 CCNDBP1O95273 360 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 SLC16A8O95907 504 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 SYF2O95926 243 aaKnown RBP8.99□□□□□ -0.97
NUP50-205ENST00000419387 F7P08709 466 aaPredicted RBP8.99□□□□□ -0.97
NUP50-205ENST00000419387 ZGLP1P0C6A0 271 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 ENO3P13929 434 aaPredicted RBP8.99□□□□□ -0.97
NUP50-205ENST00000419387 SLC1A2P43004 574 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 GLRBP48167 497 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 FNTAP49354 379 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 ABATP80404 500 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 TAP2Q03519 686 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 RELAQ04206 551 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 KLC1Q07866 573 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 MRPL49Q13405 166 aaKnown RBP8.99□□□□□ -0.97
NUP50-205ENST00000419387 CUL1Q13616 776 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 VWA2Q5GFL6 755 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 CRB2Q5IJ48 1285 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 AGAP7PQ5VUJ5 663 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 IRAK1BP1Q5VVH5 260 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 ICE2Q659A1 982 aa8.99□□□□□ -0.97
NUP50-205ENST00000419387 ZNF425Q6IV72 752 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms