RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 NR1D1P20393 614 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 HIST1H2ADP20671 130 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 IMPA1P29218 277 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 CASRP41180 1078 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 PGDP52209 483 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 IL2P60568 153 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 YBX1P67809 324 aaKnown RBP14.65□□□□□ -0.06
NUP50-204ENST00000417702 TIAL1Q01085 375 aaKnown RBP eCLIP14.65□□□□□ -0.06
NUP50-204ENST00000417702 MGAT5Q09328 741 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 ATP1A4Q13733 1029 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 HECTD2Q5U5R9 776 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 FRMPD2BQ6IN97 320 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 FAM45BPQ6NSW5 357 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 FBXO42Q6P3S6 717 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 OVCH1Q7RTY7 1134 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 ADCK2Q7Z695 626 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 MRGPREQ86SM8 312 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 PAQR7Q86WK9 346 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 OR4N4Q8N0Y3 316 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 TEX19Q8NA77 164 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 FAM45AQ8TCE6 357 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 RERGQ96A58 199 aaPredicted RBP14.65□□□□□ -0.06
NUP50-204ENST00000417702 HIST1H2AHQ96KK5 128 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 FER1L6-AS2Q96M78 137 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 CCDC138Q96M89 665 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 HIST1H2AJQ99878 128 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 WDR83Q9BRX9 315 aaKnown RBP14.65□□□□□ -0.06
NUP50-204ENST00000417702 ERP44Q9BS26 406 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 H2AFJQ9BTM1 129 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 TRIM4Q9C037 500 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 PARVBQ9HBI1 364 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 PCDHGA9Q9Y5G4 932 aaKnown RBP14.65□□□□□ -0.06
NUP50-204ENST00000417702 BOD1L1Q8NFC6 3051 aa14.65□□□□□ -0.06
NUP50-204ENST00000417702 HEATR5BQ9P2D3 2071 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 E7ESA3 106 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 H0YGG7 62 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 PYCARD-AS1I3L0S3 204 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 K7EM74 188 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 NRP2O60462 931 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 ONECUT2O95948 504 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 ARF3P61204 181 aaPredicted RBP14.64□□□□□ -0.07
NUP50-204ENST00000417702 MRPS25P82663 173 aaKnown RBP14.64□□□□□ -0.07
NUP50-204ENST00000417702 MUM1Q2TAK8 710 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 ZNF425Q6IV72 752 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 PRMT9Q6P2P2 845 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 ZBED8Q8IZ13 594 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 ZNF592Q92610 1267 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 TRIM54Q9BYV2 358 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 PCBD2Q9H0N5 130 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 DPH5Q9H2P9 285 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 CCDC177Q9NQR7 707 aaPredicted RBP14.64□□□□□ -0.07
NUP50-204ENST00000417702 SLC22A11Q9NSA0 550 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 WHRNQ9P202 907 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 STOX2Q9P2F5 926 aaPredicted RBP14.64□□□□□ -0.07
NUP50-204ENST00000417702 NXT1Q9UKK6 140 aaKnown RBP14.64□□□□□ -0.07
NUP50-204ENST00000417702 PDE10AQ9Y233 779 aa14.64□□□□□ -0.07
NUP50-204ENST00000417702 CCDC88CQ9P219 2028 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 IGKV1-8A0A0C4DH67 115 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 TXNDC9O14530 226 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 TP73O15350 636 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 CNOT3O75175 753 aaKnown RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 URI1O94763 535 aaPredicted RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 WISP1O95388 367 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 EZRP15311 586 aaKnown RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 ITGAXP20702 1163 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 FDXRP22570 491 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 HRH2P25021 359 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 OR1D4P47884 311 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 EMP3P54852 163 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 RELAQ04206 551 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 TLE1Q04724 770 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 CKAP4Q07065 602 aaKnown RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 C2orf54Q08AI8 447 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 FASTKD3Q14CZ7 662 aaKnown RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 LRRC56Q8IYG6 542 aaPredicted RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 METTL27Q8N6F8 245 aaPredicted RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 CSNK1A1LQ8N752 337 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 PYROXD1Q8WU10 500 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 COL26A1Q96A83 441 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 CABS1Q96KC9 395 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 SLC26A1Q9H2B4 701 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 WDR54Q9H977 334 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 ZNF304Q9HCX3 659 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 NSMCE4AQ9NXX6 385 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 MOCS1Q9NZB8 636 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 CDC23Q9UJX2 597 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 ADAMTS6Q9UKP5 1117 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 CDC14AQ9UNH5 594 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 UTP11Q9Y3A2 253 aaKnown RBP14.63□□□□□ -0.07
NUP50-204ENST00000417702 ZNF451Q9Y4E5 1061 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 MAU2Q9Y6X3 613 aa14.63□□□□□ -0.07
NUP50-204ENST00000417702 A6NL46 340 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 H7BY64 318 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 RAD51CO43502 376 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 CEACAM4O75871 244 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 UMODP07911 640 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 CCND1P24385 295 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 CSRP3P50461 194 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 TBPL1P62380 186 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms