RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 VPS9D1Q9Y2B5 631 aa9.78□□□□□ -0.84
HDLBP-206ENST00000417540 MRFAP1Q9Y605 127 aa9.78□□□□□ -0.84
HDLBP-206ENST00000417540 SHANK1Q9Y566 2161 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 FEZF1A0PJY2 475 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 MAGEB16A2A368 324 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 C4orf51C9J302 202 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 TK2O00142 265 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 KPNA5O15131 536 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 PFDN6O15212 129 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 KLF7O75840 302 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-206ENST00000417540 URI1O94763 535 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-206ENST00000417540 B3GALT4O96024 378 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 MT-ND3P03897 115 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 CCNYL3P0C7X3 344 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 CDH1P12830 882 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 ENO3P13929 434 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-206ENST00000417540 BCL6P41182 706 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 PMS2P54278 862 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 PLTPP55058 493 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 MAT1AQ00266 395 aaKnown RBP9.77□□□□□ -0.85
HDLBP-206ENST00000417540 BMPR2Q13873 1038 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 SYT16Q17RD7 645 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 MLIPQ5VWP3 458 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 KIAA0408Q6ZU52 694 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 PPP1R32Q7Z5V6 425 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 GALNT7Q86SF2 657 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 SYVN1Q86TM6 617 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 GPR135Q8IZ08 494 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 MYO1HQ8N1T3 1032 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 ARHGEF39Q8N4T4 335 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 FBXO15Q8NCQ5 510 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-206ENST00000417540 OR8K5Q8NH50 307 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 ZCCHC10Q8TBK6 192 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 SMPDL3AQ92484 453 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 EXT2Q93063 718 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 CCDC138Q96M89 665 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 TSNARE1Q96NA8 513 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 OR4K3Q96R72 315 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 ZFYVE21Q9BQ24 234 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 LRRC1Q9BTT6 524 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 CHRNA10Q9GZZ6 450 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 EPN3Q9H201 632 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 CCDC177Q9NQR7 707 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-206ENST00000417540 FAM114A2Q9NRY5 505 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 CUTCQ9NTM9 273 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 ZDHHC18Q9NUE0 388 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 TAS2R13Q9NYV9 303 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 MOCS1Q9NZB8 636 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 LUZP4Q9P127 313 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 WHRNQ9P202 907 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 CDC23Q9UJX2 597 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 POLHQ9Y253 713 aa9.77□□□□□ -0.85
HDLBP-206ENST00000417540 PTRH2Q9Y3E5 179 aaKnown RBP9.77□□□□□ -0.85
HDLBP-206ENST00000417540 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 A0A1B0GX78 115 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 ZNF860A6NHJ4 632 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 FAM159BA6NKW6 160 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 C9J4A7 227 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 H0YGG7 62 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 DSCR3O14972 297 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 SLC28A2O43868 658 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 KDM1AO60341 852 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 GUCA1CO95843 209 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 CMPK1P30085 196 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 CCR10P46092 362 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 ARF3P61204 181 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 IRF9Q00978 393 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 CALCOCO2Q13137 446 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 SP140Q13342 867 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 FRG1Q14331 258 aaKnown RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 SLMAPQ14BN4 828 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 TSNQ15631 228 aaKnown RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 PRTGQ2VWP7 1150 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 NKAIN1Q4KMZ8 207 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 PRR30Q53SZ7 412 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 MRPL14Q6P1L8 145 aaKnown RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 TTC23LQ6PF05 361 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 CSNK1A1LQ8N752 337 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 C9orf43Q8TAL5 461 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 PROKR1Q8TCW9 393 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 LRRC39Q96DD0 335 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 ABHD17AQ96GS6 310 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 TMEM79Q9BSE2 394 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 NAT9Q9BTE0 207 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 NLNQ9BYT8 704 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 RHOJQ9H4E5 214 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 TXLNGQ9NUQ3 528 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 GEMIN8Q9NWZ8 242 aaKnown RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 NINJ2Q9NZG7 142 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 IFT80Q9P2H3 777 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 RNF14Q9UBS8 474 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 DMGDHQ9UI17 866 aaKnown RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 KCND3Q9UK17 655 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 SRPK3Q9UPE1 567 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 FARSAQ9Y285 508 aaKnown RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 MTO1Q9Y2Z2 717 aaKnown RBP9.76□□□□□ -0.85
HDLBP-206ENST00000417540 ASB1Q9Y576 335 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 KLK4Q9Y5K2 254 aa9.76□□□□□ -0.85
HDLBP-206ENST00000417540 COMMD10Q9Y6G5 202 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms