RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 GNG8Q9UK08 70 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 PLAGL1Q9UM63 463 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 RNF11Q9Y3C5 154 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 ELOA3DA6NLF2 546 aaPredicted RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 MRPL3P09001 348 aaKnown RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 MAT2AP31153 395 aaKnown RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 AP1S2P56377 157 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 DSTNP60981 165 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 FKBP1AP62942 108 aaKnown RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 SLC25A11Q02978 314 aaKnown RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 DPYSL2Q16555 572 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 ELOA3BQ3SY89 546 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 QSOX2Q6ZRP7 698 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 MSANTD1Q6ZTZ1 278 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 TMC8Q8IU68 726 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 SLC7A5P1Q8MH63 180 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 ELOA3Q8NG57 546 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 PRRG4Q9BZD6 226 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 STOX2Q9P2F5 926 aaPredicted RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 SLC22A14Q9Y267 594 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 LOC730098B7Z3J9 87 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 OAZ2O95190 189 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 CBLP22681 906 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 PTGER3P43115 390 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 SNRPD2P62316 118 aaKnown RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 NPY5RQ15761 445 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 CYP4V2Q6ZWL3 525 aaPredicted RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 ZNF280BQ86YH2 543 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 GALNT11Q8NCW6 608 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 HNRNPABQ99729 332 aaKnown RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 AIFM2Q9BRQ8 373 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 MRPL15Q9P015 296 aaKnown RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 RUVBL1Q9Y265 456 aaKnown RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 POFUT2Q9Y2G5 429 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 ILVBLA1L0T0 632 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 TOXO94900 526 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 SNHG28P0DPA3 235 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 PRR5P85299 388 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 SLC10A6Q3KNW5 377 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 DNAJB7Q7Z6W7 309 aaPredicted RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 PEX5LQ8IYB4 626 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 SPAG16Q8N0X2 631 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 ARL14EPQ8N8R7 260 aaPredicted RBP11.75□□□□□ -0.53
UBR4-205ENST00000417040 IL1RAPQ9NPH3 570 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 TNFRSF10DQ9UBN6 386 aa11.75□□□□□ -0.53
UBR4-205ENST00000417040 A0A1W2PRQ8 180 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 RNASEH2AO75792 299 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 C8GP07360 202 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 CD72P21854 359 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 PBX3P40426 434 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 MAP3K8P41279 467 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ACADVLP49748 655 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 LILRA4P59901 499 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 CREMQ03060 361 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ALG1LQ6GMV1 187 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 AMIGO1Q86WK6 493 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 TMEM80Q96HE8 168 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ADAD1Q96M93 576 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 MIPEPQ99797 713 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ACTR3BQ9P1U1 418 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 DISP2A7MBM2 1401 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 SLC9A3R1O14745 358 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 SLC7A4O43246 635 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 RB1P06400 928 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 FGF3P11487 239 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 CMPK1P30085 196 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 DUOXA1Q1HG43 343 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 FAM76BQ5HYJ3 339 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 KIAA0930Q6ICG6 404 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 HFE2Q6ZVN8 426 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 PACRGLQ8N7B6 248 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 NIPA2Q8N8Q9 360 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 DRAXINQ8NBI3 349 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 GLB1L3Q8NCI6 653 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 ZNF717Q9BY31 904 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 PARPBPQ9NWS1 579 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 PAQR5Q9NXK6 330 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 DPP7Q9UHL4 492 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 EIF1AYO14602 144 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 C8orf89P0DMQ9 161 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ANXA8P13928 327 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 LCN1P31025 176 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 CSKP41240 450 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 GRK6P43250 576 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 EIF1AXP47813 144 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 SLC13A2Q13183 592 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 MINDY4Q4G0A6 757 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ABCA11PQ4W5N1 156 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 ZNF648Q5T619 568 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 PRSS55Q6UWB4 352 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 ZC3HC1Q86WB0 502 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 PAQR7Q86WK9 346 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 C1orf52Q8N6N3 182 aaKnown RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 ZNF675Q8TD23 568 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 TWNKQ96RR1 684 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 TM9SF2Q99805 663 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 OR2AG1Q9H205 316 aa11.74□□□□□ -0.53
UBR4-205ENST00000417040 HMX1Q9NP08 348 aaPredicted RBP11.74□□□□□ -0.53
UBR4-205ENST00000417040 ENAMQ9NRM1 1142 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms