RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FAM169AQ9Y6X4 670 aa14.42□□□□□ -0.1
UBXN4-203ENST00000416538 ZGRF1Q86YA3 2104 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 HYKKA2RU49 373 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 VSTM2BA6NLU5 285 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 E7ENX8 843 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 H0YGG7 62 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 GFYI3L273 518 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 AGPSO00116 658 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 DNALI1O14645 258 aaPredicted RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 CATP04040 527 aaKnown RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 MMP11P24347 488 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 IMPA1P29218 277 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 EFNA3P52797 238 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 ARF3P61204 181 aaPredicted RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 TAP2Q03519 686 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 DHX9Q08211 1270 aaKnown RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 Q0VFX4 171 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 TSTA3Q13630 321 aaPredicted RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 PTK6Q13882 451 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 HKDC1Q2TB90 917 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 YOD1Q5VVQ6 348 aaPredicted RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 ICE2Q659A1 982 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 KIRREL2Q6UWL6 708 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 MBOAT1Q6ZNC8 495 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 KCNMB4Q86W47 210 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 RAB42Q8N4Z0 105 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 AMER2Q8N7J2 671 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 FBXO15Q8NCQ5 510 aaPredicted RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 MAGEC3Q8TD91 643 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 ASB11Q8WXH4 323 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 SMPDL3AQ92484 453 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 IP6K3Q96PC2 410 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 NAP1L3Q99457 506 aaPredicted RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 ZFYVE21Q9BQ24 234 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 MRPS30Q9NP92 439 aaKnown RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 IARS2Q9NSE4 1012 aaKnown RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 ZC3H7BQ9UGR2 993 aaKnown RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 ADAMTS6Q9UKP5 1117 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 RUVBL1Q9Y265 456 aaKnown RBP14.41□□□□□ -0.1
UBXN4-203ENST00000416538 VPS9D1Q9Y2B5 631 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 DHRS7Q9Y394 339 aa14.41□□□□□ -0.1
UBXN4-203ENST00000416538 MAGEB16A2A368 324 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 CES2O00748 559 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 PFDN6O15212 129 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 SRPX2O60687 465 aaPredicted RBP14.4□□□□□ -0.1
UBXN4-203ENST00000416538 DPM1O60762 260 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 ALBP02768 609 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 STATHP02808 62 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 EIF2S1P05198 315 aaKnown RBP14.4□□□□□ -0.1
UBXN4-203ENST00000416538 MPC1LP0DKB6 136 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 ERVK-10P10266 1014 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 PGAM1P18669 254 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 CMPK1P30085 196 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 SKIV2L2P42285 1042 aaKnown RBP14.4□□□□□ -0.1
UBXN4-203ENST00000416538 ARHGAP19Q14CB8 494 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 INPP5JQ15735 1006 aaPredicted RBP14.4□□□□□ -0.1
UBXN4-203ENST00000416538 PLD3Q8IV08 490 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 PRSS58Q8IYP2 241 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 C2CD4AQ8NCU7 369 aaPredicted RBP14.4□□□□□ -0.1
UBXN4-203ENST00000416538 GRK7Q8WTQ7 553 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 SLCO2A1Q92959 643 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 PNPLA2Q96AD5 504 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 C19orf60Q96EN9 201 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 FER1L6-AS2Q96M78 137 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 OR2A5Q96R48 311 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 FAM114A2Q9NRY5 505 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 KLHL42Q9P2K6 505 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 ASIC3Q9UHC3 531 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 CDC23Q9UJX2 597 aa14.4□□□□□ -0.1
UBXN4-203ENST00000416538 MRPS2Q9Y399 296 aaKnown RBP14.4□□□□□ -0.1
UBXN4-203ENST00000416538 UTP20O75691 2785 aaKnown RBP14.39□□□□□ -0.11
UBXN4-203ENST00000416538 NBPF19A0A087WUL8 3843 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 GOLGA6L10A0A0M3HER8 536 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 SMAPO00193 183 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 PEX12O00623 359 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 HAT1O14929 419 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 TP73O15350 636 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 RPA3P35244 121 aaPredicted RBP14.39□□□□□ -0.11
UBXN4-203ENST00000416538 CDKN2DP55273 166 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 SOX8P57073 446 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 PRDX1Q06830 199 aaKnown RBP14.39□□□□□ -0.11
UBXN4-203ENST00000416538 KLC1Q07866 573 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 PPP1R7Q15435 360 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 ZXDCQ2QGD7 858 aaPredicted RBP14.39□□□□□ -0.11
UBXN4-203ENST00000416538 TTLL9Q3SXZ7 439 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 PLEKHN1Q494U1 663 aaPredicted RBP14.39□□□□□ -0.11
UBXN4-203ENST00000416538 ATCAYQ86WG3 371 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 CSNK1A1LQ8N752 337 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 AMER3Q8N944 861 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 CLEC1AQ8NC01 280 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 OR11G2Q8NGC1 345 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 STT3BQ8TCJ2 826 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 TRIM51Q9BSJ1 452 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 FAM167BQ9BTA0 163 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 ABCF3Q9NUQ8 709 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 PCYOX1Q9UHG3 505 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 NTNG1Q9Y2I2 539 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 POLEQ07864 2286 aa14.39□□□□□ -0.11
UBXN4-203ENST00000416538 IGLV3-12A0A075B6K2 115 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms