RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MDC1Q14676 2089 aaKnown RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 SLMAPQ14BN4 828 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ZIC1Q15915 447 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 PRTGQ2VWP7 1150 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 WASHC2DQ5SRD0 308 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 THEMIS2Q5TEJ8 643 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 FCRL6Q6DN72 434 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 AGTRAPQ6RW13 159 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 NAPRTQ6XQN6 538 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ATG14Q6ZNE5 492 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 VASH2Q86V25 355 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 PAQR7Q86WK9 346 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 IGDCC3Q8IVU1 814 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 KLHDC8AQ8IYD2 350 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 LRRC56Q8IYG6 542 aaPredicted RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 CPNE9Q8IYJ1 553 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 SLC38A9Q8NBW4 561 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 TRPV3Q8NET8 790 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 OR56A3Q8NH54 315 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 STAG3L4Q8TBR4 150 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ADAMTS17Q8TE56 1095 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 NAT14Q8WUY8 206 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 TM9SF4Q92544 642 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 PMEPA1Q969W9 287 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 FBXL8Q96CD0 374 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ELMO2Q96JJ3 720 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 UBXN10Q96LJ8 280 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 OR2A5Q96R48 311 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 CYTH2Q99418 400 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 TRIM51Q9BSJ1 452 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 MCMBPQ9BTE3 642 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 SGPP1Q9BX95 441 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 FUT8Q9BYC5 575 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 TRIM31Q9BZY9 425 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 DERL2Q9GZP9 239 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 SPRTNQ9H040 489 aaPredicted RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 CHST8Q9H2A9 424 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ACTL8Q9H568 366 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 NT5DC2Q9H857 520 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 MLXIPLQ9NP71 852 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 SAYSD1Q9NPB0 183 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 MKKSQ9NPJ1 570 aaPredicted RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 ATP13A2Q9NQ11 1180 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ACSS2Q9NR19 701 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 CUTCQ9NTM9 273 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 C14orf105Q9NVL8 296 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 WDR70Q9NW82 654 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ARL15Q9NXU5 204 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 GPRC5BQ9NZH0 403 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 GRHL1Q9NZI5 618 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 STOX2Q9P2F5 926 aaPredicted RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 GALPQ9UBC7 116 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ZNF282Q9UDV7 671 aaPredicted RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 IL17BQ9UHF5 180 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 TMCO1Q9UM00 188 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 PDE10AQ9Y233 779 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 MAN2B2Q9Y2E5 1009 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 ZNF451Q9Y4E5 1061 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 HEMK1Q9Y5R4 338 aaPredicted RBP6.12□□□□□ -1.43
USP54-202ENST00000413442 SLC22A7Q9Y694 548 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 NBEAQ8NFP9 2946 aa6.12□□□□□ -1.43
USP54-202ENST00000413442 FAM95CA0A1B0GW59 222 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 TCRBV9S1A1TA0A576 114 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 TRBC2A0A5B9 178 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 VSTM2BA6NLU5 285 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 SYCE1LA8MT33 242 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 KLF7O75840 302 aaPredicted RBP6.11□□□□□ -1.43
USP54-202ENST00000413442 CEACAM4O75871 244 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 TSPAN12O95859 305 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 SYF2O95926 243 aaKnown RBP6.11□□□□□ -1.43
USP54-202ENST00000413442 ALPPP05187 535 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 SLC35G6P0C7Q6 338 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 COL6A2P12110 1019 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 PVRP15151 417 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 GNAZP19086 355 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 F8A1P23610 371 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 IMPA1P29218 277 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 AVPR1BP47901 424 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 SERPINB9P50453 376 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 CCR8P51685 355 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 ARFIP1P53367 373 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 TERF1P54274 439 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 RAB10P61026 200 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 MPP1Q00013 466 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 TIAL1Q01085 375 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP54-202ENST00000413442 PCDH1Q08174 1060 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 KLRB1Q12918 225 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 AIMP2Q13155 320 aaKnown RBP6.11□□□□□ -1.43
USP54-202ENST00000413442 LAPTM5Q13571 262 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 CSHL1Q14406 222 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 HERC3Q15034 1050 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 DEFB109BQ30KR1 87 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.11□□□□□ -1.43
USP54-202ENST00000413442 PRAMEF13Q5VWM6 474 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 MLIPQ5VWP3 458 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 C16orf46Q6P387 395 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 PCSK4Q6UW60 755 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 TTLL10Q6ZVT0 673 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 TAOK1Q7L7X3 1001 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 LCA5Q86VQ0 697 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms