RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NXPE4Q6UWF7 544 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 C16orf89Q6UX73 402 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 FAM129CQ86XR2 697 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 ULK2Q8IYT8 1036 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PGAM4Q8N0Y7 254 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 KYQ8NBH2 561 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 OR2L8Q8NGY9 312 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PROKR1Q8TCW9 393 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 GPBAR1Q8TDU6 330 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 ZFAND2BQ8WV99 257 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 SELENOMQ8WWX9 145 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 SMPDL3AQ92484 453 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 MCUR1Q96AQ8 359 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 C11orf24Q96F05 449 aaPredicted RBP5.33□□□□□ -1.56
EPHA4-202ENST00000409854 IL17FQ96PD4 163 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 TPSD1Q9BZJ3 242 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PCBD2Q9H0N5 130 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 OSGEPL1Q9H4B0 414 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 EFCAB1Q9HAE3 211 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PELI2Q9HAT8 420 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 LRTM1Q9HBL6 345 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PRDM8Q9NQV8 689 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 SCHIP1Q9P0W5 487 aaPredicted RBP5.33□□□□□ -1.56
EPHA4-202ENST00000409854 TBC1D29Q9UFV1 150 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PLAGL1Q9UM63 463 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PRPF19Q9UMS4 504 aaKnown RBP5.33□□□□□ -1.56
EPHA4-202ENST00000409854 TMED5Q9Y3A6 229 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PCDHGA11Q9Y5H2 935 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 CFAP20Q9Y6A4 193 aaKnown RBP5.33□□□□□ -1.56
EPHA4-202ENST00000409854 ARHGEF17Q96PE2 2063 aaPredicted RBP5.33□□□□□ -1.56
EPHA4-202ENST00000409854 METTL12A8MUP2 240 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 PRICKLE3O43900 615 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 NRP2O60462 931 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 FESP07332 822 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 EZRP15311 586 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 CAPN3P20807 821 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 VARSP26640 1264 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 CD27P26842 260 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 IL12AP29459 219 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 PGM1P36871 562 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 NUDT2P50583 147 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 RAB28P51157 221 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 THOP1P52888 689 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 RPL38P63173 70 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 MXRA7P84157 204 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 HMGCS1Q01581 520 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 MTAPQ13126 283 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 CLPPQ16740 277 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 WASHC2DQ5SRD0 308 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 CYP20A1Q6UW02 462 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SUSD1Q6UWL2 747 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 DCP2Q8IU60 420 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 DSELQ8IZU8 1212 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 FAM160A2Q8N612 972 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 LINC01555Q8NAE3 123 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 VPS37AQ8NEZ2 397 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 ABHD11Q8NFV4 315 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 GIMAP1Q8WWP7 306 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 TSACCQ96A04 125 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 REPS1Q96D71 796 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 TEX37Q96LM6 180 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 FERD3LQ96RJ6 166 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 C1orf50Q9BV19 199 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SIRT5Q9NXA8 310 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 DLGAP2Q9P1A6 1054 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 ICKQ9UPZ9 632 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 TDRKHQ9Y2W6 561 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 POLR3HQ9Y535 204 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 MDC1Q14676 2089 aaKnown RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 A0A1W2PR77 199 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 PIPSLA2A3N6 862 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 DYTNA2CJ06 578 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 FAM234BA2RU67 622 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 ASPDHA6ND91 283 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 A8MUI8 341 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 FOXE1O00358 373 aaPredicted RBP5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SLC22A3O75751 556 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 EML2O95834 649 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 G6PDP11413 515 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 AMD1P17707 334 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 NDUFS1P28331 727 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 UFM1P61960 85 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 FZD2Q14332 565 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 IMPG1Q17R60 797 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 ZNF423Q2M1K9 1284 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 PAGE2BQ5JRK9 111 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 CATSPEREQ5SY80 951 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 IL23RQ5VWK5 629 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 MED27Q6P2C8 311 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 TMPRSS11BQ86T26 416 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 RETREG3Q86VR2 466 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 IQCHQ86VS3 1027 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 SCUBE1Q8IWY4 988 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 DEFB107AQ8IZN7 70 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 RAB42Q8N4Z0 105 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 LMNTD1Q8N9Z9 388 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 OR7G3Q8NG95 312 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 OR4K1Q8NGD4 311 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 RLN3Q8WXF3 142 aa5.32□□□□□ -1.56
EPHA4-202ENST00000409854 ROPN1LQ96C74 230 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms