RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 IGHV3-20A0A0C4DH32 117 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 CCDC162PA2VCL2 907 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 KRT87PA6NCN2 255 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 E9PLN8 166 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 H0YGG7 62 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ADAM10O14672 748 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ASNA1O43681 348 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 SEC24DO94855 1032 aaPredicted RBP15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ANXA5P08758 320 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 EEF1DP29692 281 aaKnown RBP15.8■□□□□ 0.12
CHMP3-203ENST00000409225 EFNA3P52797 238 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ARF3P61204 181 aaPredicted RBP15.8■□□□□ 0.12
CHMP3-203ENST00000409225 OR1C1Q15619 314 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 SYT16Q17RD7 645 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ACER2Q5QJU3 275 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 DARS2Q6PI48 645 aaKnown RBP15.8■□□□□ 0.12
CHMP3-203ENST00000409225 SIAH3Q8IW03 269 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ZC3H7AQ8IWR0 971 aaKnown RBP15.8■□□□□ 0.12
CHMP3-203ENST00000409225 GHDCQ8N2G8 530 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 MDS2Q8NDY4 140 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ACTL9Q8TC94 416 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 NRGNQ92686 78 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ZNF354BQ96LW1 612 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 FRMD6Q96NE9 622 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 PPP1R2P1Q96PQ5 205 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ZFYVE21Q9BQ24 234 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 VKORC1Q9BQB6 163 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 RAB11FIP5Q9BXF6 653 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 TGIF2Q9GZN2 237 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 COQ3Q9NZJ6 369 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 TNFRSF10DQ9UBN6 386 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 KLK4Q9Y5K2 254 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ALG6Q9Y672 507 aa15.8■□□□□ 0.12
CHMP3-203ENST00000409225 ASPDHA6ND91 283 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 IQCF5A8MTL0 148 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 F8W8V4 182 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 GPC4O75487 556 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 TSPAN12O95859 305 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 C8orf89P0DMQ9 161 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 DNAJA1P31689 397 aaKnown RBP15.79■□□□□ 0.12
CHMP3-203ENST00000409225 SLC26A3P40879 764 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 BDKRB1P46663 353 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 EIF3EP60228 445 aaKnown RBP15.79■□□□□ 0.12
CHMP3-203ENST00000409225 YBX1P67809 324 aaKnown RBP15.79■□□□□ 0.12
CHMP3-203ENST00000409225 FASTKQ14296 549 aaKnown RBP15.79■□□□□ 0.12
CHMP3-203ENST00000409225 BTBD16Q32M84 506 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 CCSMST1Q4G0I0 132 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 SPINK14Q6IE38 97 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 FBXO42Q6P3S6 717 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 TTC23LQ6PF05 361 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 ASZ1Q8WWH4 475 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 MVB12AQ96EY5 273 aa15.79■□□□□ 0.12
CHMP3-203ENST00000409225 UTP23Q9BRU9 249 aaKnown RBP15.79■□□□□ 0.12
CHMP3-203ENST00000409225 RUVBL1Q9Y265 456 aaKnown RBP15.79■□□□□ 0.12
CHMP3-203ENST00000409225 A0A0A6YYC8 382 aaPredicted RBP15.78■□□□□ 0.12
CHMP3-203ENST00000409225 OR2A25A4D2G3 310 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 I3L1I5 382 aaPredicted RBP15.78■□□□□ 0.12
CHMP3-203ENST00000409225 PRRG2O14669 202 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 SLCO2B1O94956 709 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 APOA4P06727 396 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 RBP3P10745 1247 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 DRD2P14416 443 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 CD46P15529 392 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 CTNNA2P26232 953 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 CD96P40200 585 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 IST1P53990 364 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 TPM4P67936 248 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 MAT1AQ00266 395 aaKnown RBP15.78■□□□□ 0.12
CHMP3-203ENST00000409225 GTF3C1Q12789 2109 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 HKDC1Q2TB90 917 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 CCDC38Q502W7 563 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 LANCL3Q6ZV70 420 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 GALNTL5Q7Z4T8 443 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.78■□□□□ 0.12
CHMP3-203ENST00000409225 TGIF2LYQ8IUE0 185 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 CHERPQ8IWX8 916 aaKnown RBP15.78■□□□□ 0.12
CHMP3-203ENST00000409225 EID3Q8N140 333 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 KRT222Q8N1A0 295 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 RAB42Q8N4Z0 105 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 CSNK1A1LQ8N752 337 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 TMEM178AQ8NBL3 297 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 OR2A1Q8NGT9 310 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 METTL21AQ8WXB1 218 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 RAD51AP1Q96B01 352 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 SCMH1Q96GD3 660 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 TTC1Q99614 292 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 TRIM51Q9BSJ1 452 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 DPH7Q9BTV6 452 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 ACAT2Q9BWD1 397 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 TSSK1BQ9BXA7 367 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 SYNPO2LQ9H987 977 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 KCNK13Q9HB14 408 aa15.78■□□□□ 0.12
CHMP3-203ENST00000409225 PRRC2AP48634 2157 aaKnown RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 A0A0U1RQJ8 604 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 A0A1W2PPV9 198 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 MROH6A6NGR9 719 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 IGFBP2P18065 325 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 EMP3P54852 163 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 TMED2Q15363 201 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 MFSD4BQ5TF39 518 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms