RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 DEFB109BQ30KR1 87 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 LINC00303Q3SY05 128 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 FRMPD2BQ6IN97 320 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 BORAQ6PGQ7 559 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 TTLL10Q6ZVT0 673 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 RNF44Q7L0R7 432 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ADCK2Q7Z695 626 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 PAQR7Q86WK9 346 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ENDOVQ8N8Q3 282 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 TTC29Q8NA56 475 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 PROKR1Q8TCW9 393 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ANKRD7Q92527 254 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 GPR22Q99680 433 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ZFYVE21Q9BQ24 234 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 NLNQ9BYT8 704 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 FAM117AQ9C073 453 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 PCBD2Q9H0N5 130 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 IKZF3Q9UKT9 509 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 NOVA2Q9UNW9 492 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 LOC105369274A0A096LPK9 316 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 LOC102723532A0A0G2JNH3 316 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 CDC14CA4D256 554 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 C9J4A7 227 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 TK2O00142 265 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 CDC7O00311 574 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 FAM155BO75949 473 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 RECKO95980 971 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 EIF2S1P05198 315 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 STMN1P16949 149 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 CCND1P24385 295 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 PHBP35232 272 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 DCDP81605 110 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 LY6DQ14210 128 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 PRAMEF13Q5VWM6 474 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ZNF385CQ66K41 422 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 OR4N4Q8N0Y3 316 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ANKRD49Q8WVL7 239 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ATL1Q8WXF7 558 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 ZNF285Q96NJ3 590 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 CUTCQ9NTM9 273 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 CUEDC1Q9NWM3 386 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 CTNNAL1Q9UBT7 734 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 NDOR1Q9UHB4 597 aa17.18■□□□□ 0.34
PDLIM2-206ENST00000409141 PIEZO2Q9H5I5 2752 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 NPEPPSL1A6NEC2 478 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 H7BY64 318 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 CAPN1P07384 714 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 HRH2P25021 359 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 FAM214AQ32MH5 1076 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 YOD1Q5VVQ6 348 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 MLIPQ5VWP3 458 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 ZNF425Q6IV72 752 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 CAPN13Q6MZZ7 669 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 FAM198BQ6UWH4 519 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 SBSNQ6UWP8 590 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 SYVN1Q86TM6 617 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 RELL1Q8IUW5 271 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 FBXL8Q96CD0 374 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 MRRFQ96E11 262 aaKnown RBP17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 PRAP1Q96NZ9 151 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 FMO2Q99518 471 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 C17orf62Q9BQA9 187 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 TMEM184CQ9NVA4 438 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 NINJ2Q9NZG7 142 aa17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 GPN3Q9UHW5 284 aaPredicted RBP17.17■□□□□ 0.34
PDLIM2-206ENST00000409141 ATRXP46100 2492 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 FITM1A5D6W6 292 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 H0YGG7 62 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 PHGDHO43175 533 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 FURINP09958 794 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 EZRP15311 586 aaKnown RBP17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 CCR10P46092 362 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 GCGRP47871 477 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 ARF3P61204 181 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 EFTUD2Q15029 972 aaKnown RBP eCLIP17.16■□□□□ 0.346e-8■■■■□ 20.2
PDLIM2-206ENST00000409141 NKAIN1Q4KMZ8 207 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 C17orf64Q86WR6 236 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 SPATA6LQ8N4H0 392 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 PYCR2Q96C36 320 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 CYTH2Q99418 400 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 SGPP1Q9BX95 441 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 ENAMQ9NRM1 1142 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 IFT80Q9P2H3 777 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 TCFL5Q9UL49 500 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 POLHQ9Y253 713 aa17.16■□□□□ 0.34
PDLIM2-206ENST00000409141 LOC400499M0QZD8 3231 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 ANKRD12Q6UB98 2062 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 A0A1B0GX78 115 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 HYKKA2RU49 373 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 HAT1O14929 419 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 DSCR3O14972 297 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 FAM87AP0C7U9 286 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 CCDC166P0CW27 439 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 NPPBP16860 134 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 RAB10P61026 200 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 NFKB2Q00653 900 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 RELAQ04206 551 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 SLC9A5Q14940 896 aa17.15■□□□□ 0.34
PDLIM2-206ENST00000409141 NCF4Q15080 339 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms