RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 C10orf90Q96M02 699 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 EBNA1BP2Q99848 306 aaKnown RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 CDC23Q9UJX2 597 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 COMMD10Q9Y6G5 202 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 AGPSO00116 658 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 ALOX12BO75342 701 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 ENO3P13929 434 aaPredicted RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 HSD17B2P37059 387 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 SRSF1Q07955 248 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 PRR30Q53SZ7 412 aaPredicted RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 SLC6A19Q695T7 634 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 LRRC56Q8IYG6 542 aaPredicted RBP18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 PWWP2AQ96N64 755 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 MESP1Q9BRJ9 268 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 PLAC1Q9HBJ0 212 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 FBXL4Q9UKA2 621 aa18.41■□□□□ 0.54
SMARCB1-204ENST00000407422 USP9YO00507 2555 aaPredicted RBP18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 SMAPO00193 183 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 SOCS6O14544 535 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 ZBTB14O43829 449 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 VPS26AO75436 327 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 MYBPC3Q14896 1274 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 NAA25Q14CX7 972 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 PRTGQ2VWP7 1150 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 BBS9Q3SYG4 887 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 HP1BP3Q5SSJ5 553 aaPredicted RBP18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 VWA5B1Q5TIE3 1220 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 ZNF425Q6IV72 752 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 UBE2R2Q712K3 238 aaPredicted RBP18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 ATCAYQ86WG3 371 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 CREG2Q8IUH2 290 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 KLHL7Q8IXQ5 586 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 COL26A1Q96A83 441 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 ZNF552Q9H707 407 aaPredicted RBP18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 ZNF304Q9HCX3 659 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 SLC17A6Q9P2U8 582 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 HS3ST3B1Q9Y662 390 aa18.4■□□□□ 0.54
SMARCB1-204ENST00000407422 ESPL1Q14674 2120 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 VSTM2BA6NLU5 285 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 ZNF839A8K0R7 811 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 IGHEP01854 428 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 IMPA1P29218 277 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 SKIV2L2P42285 1042 aaKnown RBP18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 UQCRFS1P47985 274 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 UBAP2LQ14157 1087 aaKnown RBP18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 HKDC1Q2TB90 917 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 SPANXN3Q5MJ09 141 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 RBM20Q5T481 1227 aaKnown RBP18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 KIRREL2Q6UWL6 708 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 PCGF5Q86SE9 256 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 EEF1AKMT1Q8WVE0 214 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 ZBTB20Q9HC78 741 aaPredicted RBP18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 ATP13A2Q9NQ11 1180 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 CUEDC1Q9NWM3 386 aaPredicted RBP18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 ANKMY1Q9P2S6 941 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 TRMT6Q9UJA5 497 aaKnown RBP18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 ADAMTS6Q9UKP5 1117 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 RUVBL1Q9Y265 456 aaKnown RBP18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 MAP4K5Q9Y4K4 846 aa18.39■□□□□ 0.53
SMARCB1-204ENST00000407422 MAST4O15021 2626 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CLEC18AA5D8T8 446 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CYSRT1A8MQ03 144 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 TTC4O95801 387 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 AHSGP02765 367 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CARSP49589 748 aaKnown RBP18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CDKN2DP55273 166 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 GNG11P61952 73 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 MUM1Q2TAK8 710 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CLEC18BQ6UXF7 455 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 HPS6Q86YV9 775 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 PLD3Q8IV08 490 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 PRSS58Q8IYP2 241 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CSNK1A1LQ8N752 337 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 EFCAB3Q8N7B9 438 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CLEC18CQ8NCF0 446 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 STT3BQ8TCJ2 826 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 NACC2Q96BF6 587 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CABS1Q96KC9 395 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 OR2A5Q96R48 311 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 WDR83Q9BRX9 315 aaKnown RBP18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 SLAMF7Q9NQ25 335 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 C5AR2Q9P296 337 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 NXT1Q9UKK6 140 aaKnown RBP18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 SPTAN1Q13813 2472 aaKnown RBP18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 FFAR3O14843 346 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 GPR42O15529 346 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CCNDBP1O95273 360 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 PGGT1BP53609 377 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 SOX8P57073 446 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 KLC1Q07866 573 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 INPP5JQ15735 1006 aaPredicted RBP18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 PLEKHN1Q494U1 663 aaPredicted RBP18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 THEMIS2Q5TEJ8 643 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 PRMT9Q6P2P2 845 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 PAQR3Q6TCH7 311 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 ADCK2Q7Z695 626 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CNTN4Q8IWV2 1026 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 PNPLA2Q96AD5 504 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 CERS2Q96G23 380 aa18.38■□□□□ 0.53
SMARCB1-204ENST00000407422 NAV2Q8IVL1 2488 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms