RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MEX3BQ6ZN04 569 aaKnown RBP2.49□□□□□ -2.01
CD47-203ENST00000398258 PHLDB2Q86SQ0 1253 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 IQCA1Q86XH1 822 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 DZIP1Q86YF9 867 aaKnown RBP2.49□□□□□ -2.01
CD47-203ENST00000398258 MARVELD2Q8N4S9 558 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 ZNF713Q8N859 430 aaPredicted RBP2.49□□□□□ -2.01
CD47-203ENST00000398258 DMBX1Q8NFW5 382 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 TRIM58Q8NG06 486 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 OR10Q1Q8NGQ4 319 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 NCOA7Q8NI08 942 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 FCAMRQ8WWV6 532 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 GDAP1L1Q96MZ0 367 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 TRAF4Q9BUZ4 470 aaPredicted RBP2.49□□□□□ -2.01
CD47-203ENST00000398258 GTPBP2Q9BX10 602 aaKnown RBP2.49□□□□□ -2.01
CD47-203ENST00000398258 S1PR5Q9H228 398 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 MMP28Q9H239 520 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 DNAJC17Q9NVM6 304 aaKnown RBP2.49□□□□□ -2.01
CD47-203ENST00000398258 FAM118AQ9NWS6 357 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 STUB1Q9UNE7 303 aa2.49□□□□□ -2.01
CD47-203ENST00000398258 PA2G4Q9UQ80 394 aaKnown RBP2.49□□□□□ -2.01
CD47-203ENST00000398258 IL16Q14005 1332 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 IGHV4-61A0A0C4DH41 118 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ANKRD61A6NGH8 418 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 P2RY10O00398 339 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 SLC33A1O00400 549 aaPredicted RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 PPIP5K2O43314 1243 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 RPS6KA5O75582 802 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 DFFBO76075 338 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 NADKO95544 446 aaPredicted RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 SLC16A8O95907 504 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 IGHV4-59P01825 116 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 NR3C1P04150 777 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 RLN1P04808 185 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 MYL6BP14649 208 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ATP6V1B1P15313 513 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 LBPP18428 481 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ANOS1P23352 680 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 JAK1P23458 1154 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 CD27P26842 260 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 TIMP3P35625 211 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 NKX2-1P43699 371 aaPredicted RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 DVL1P1P54792 670 aaPredicted RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 SNU13P55769 128 aaKnown RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 STX1BP61266 288 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 HERV-K104P61576 105 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 RASGEF1BQ0VAM2 473 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 P2RY6Q15077 328 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 TAF13Q15543 124 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 FUT11Q495W5 492 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 XKR3Q5GH77 459 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 WDR38Q5JTN6 314 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 SLC35D3Q5M8T2 416 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 FAM166AQ6J272 317 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 CYB5D1Q6P9G0 228 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 SHQ1Q6PI26 577 aaKnown RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 BTNL8Q6UX41 500 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ISCA2Q86U28 154 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 HOOK3Q86VS8 718 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 UNC45BQ8IWX7 931 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 APCDD1Q8J025 514 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 LGI2Q8N0V4 545 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 NUP93Q8N1F7 819 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 LMNTD1Q8N9Z9 388 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 NOA1Q8NC60 698 aaKnown RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 TEKT1Q969V4 418 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ALG14Q96F25 216 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 THOC1Q96FV9 657 aaKnown RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 PANK2Q9BZ23 570 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 OR2B2Q9GZK3 357 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ZMYND12Q9H0C1 365 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 SHARPINQ9H0F6 387 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 UBQLN3Q9H347 655 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 MINDY3Q9H8M7 445 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 PNPLA3Q9NST1 481 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ABCB8Q9NUT2 735 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 C2orf42Q9NWW7 574 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ADPRHL2Q9NX46 363 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 MIS18AQ9NYP9 233 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 PTTG2Q9NZH5 202 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 CNIH4Q9P003 139 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 TAAR2Q9P1P5 351 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 CACNG4Q9UBN1 327 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 ARMCX3Q9UH62 379 aaPredicted RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 MAN1B1Q9UKM7 699 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 KLK4Q9Y5K2 254 aa2.48□□□□□ -2.01
CD47-203ENST00000398258 TP53BP1Q12888 1972 aaPredicted RBP2.48□□□□□ -2.01
CD47-203ENST00000398258 A0A1W2PPW3 197 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ILVBLA1L0T0 632 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 LRRD1A4D1F6 860 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 F8VVB4 439 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 F8VWA3 439 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ST8SIA3O43173 380 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 GLRA3O75311 464 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 BAG3O95817 575 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 PAK4O96013 591 aaPredicted RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 VTNP04004 478 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ERVK-10P10266 1014 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 CDH3P22223 829 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ITGA3P26006 1051 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms