RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 GK5Q6ZS86 529 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CHST15Q7LFX5 561 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 PIWIL3Q7Z3Z3 882 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 SLC22A16Q86VW1 577 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CIR1Q86X95 450 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 AQP12AQ8IXF9 295 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 FAM20CQ8IXL6 584 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 OFCC1Q8IZS5 231 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 DHRSXQ8N5I4 330 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 GPR152Q8TDT2 470 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 ASB11Q8WXH4 323 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 PABPC5Q96DU9 382 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 NRBF2Q96F24 287 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CENPNQ96H22 339 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 ELMO2Q96JJ3 720 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 MSLNLQ96KJ4 702 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 FUNDC2Q9BWH2 189 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 BTBD2Q9BX70 525 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 BBS2Q9BXC9 721 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 SAP130Q9H0E3 1048 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 GIMAP4Q9NUV9 329 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 SMPD3Q9NY59 655 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 TSR3Q9UJK0 312 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 EIF3LQ9Y262 564 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 MAN2B2Q9Y2E5 1009 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 GPR45Q9Y5Y3 372 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 MN1Q10571 1320 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 TTC24A2A3L6 582 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 ISPDA4D126 451 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 E9PQ18 207 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 TLL1O43897 1013 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 VEGFDO43915 354 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 RFPL2O75678 378 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CDK14O94921 469 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CRYZL1O95825 349 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CAPN1P07384 714 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CD46P15529 392 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 TIMP2P16035 220 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 SYN1P17600 705 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 ITGALP20701 1170 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 MC4RP32245 332 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 YAP1P46937 504 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 IL2P60568 153 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 RCAN2Q14206 197 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 DHCR24Q15392 516 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 TEAD2Q15562 447 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 HNRNPA1L2Q32P51 320 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 AASDHQ4L235 1098 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 C9orf64Q5T6V5 341 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 GPR158Q5T848 1215 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 NPAS3Q8IXF0 933 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 PIANPQ8IYJ0 282 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 SLC22A15Q8IZD6 547 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 SFRP1Q8N474 314 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 OR4K2Q8NGD2 314 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CYGBQ8WWM9 190 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 DNASE1L2Q92874 299 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 MARK4Q96L34 752 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 HOPXQ9BPY8 73 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 SPATA9Q9BWV2 254 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 ASPSCR1Q9BZE9 553 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 MIR1-1HGQ9H1L0 117 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 DPEP2Q9H4A9 486 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 BRF2Q9HAW0 419 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 UGT2A1Q9Y4X1 527 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 TNRC6BQ9UPQ9 1833 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 GLYATL1P3A0A0U1RQE8 302 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TK2O00142 265 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 MEN1O00255 615 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 EEDO75530 441 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 KCNK2O95069 426 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 PRNPP04156 253 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ADH5P11766 374 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 BMP1P13497 986 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HTR1BP28222 390 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NUDT1P36639 197 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CASP3P42574 277 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 KCNC1P48547 511 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HK3P52790 923 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 IST1P53990 364 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 EMX2Q04743 252 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ELP6Q0PNE2 266 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ARHGAP19Q14CB8 494 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 SWI5Q1ZZU3 235 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 RBM48Q5RL73 367 aaKnown RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 CRTC3Q6UUV7 619 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 UNC5DQ6UXZ4 953 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CUZD1Q86UP6 607 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 LRRC56Q8IYG6 542 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 SPARTQ8N0X7 666 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CFAP52Q8N1V2 620 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NATD1Q8N6N6 113 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 GLB1L3Q8NCI6 653 aaPredicted RBP5.2□□□□□ -1.58
VPS41-203ENST00000395969 OR6Q1Q8NGQ2 317 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 OR13C4Q8NGS5 318 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 MUL1Q969V5 352 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CXorf40BQ96DE9 158 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 MCOLN1Q9GZU1 580 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TOR3AQ9H497 397 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 AIG1Q9NVV5 245 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms