RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 C19orf25Q9UFG5 118 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 DOT1LQ8TEK3 1739 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CDC7O00311 574 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 OR1I1O60431 355 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 C8BP07358 591 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PRKCHP24723 683 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PEX2P28328 305 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 DGKEP52429 567 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SLBPQ14493 270 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 OR2T5Q6IEZ7 315 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PDE12Q6L8Q7 609 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 OR2T29Q8NH02 315 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 C1orf216Q8TAB5 229 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 MOAP1Q96BY2 351 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 NXPE2Q96DL1 559 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 GPR22Q99680 433 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 C11orf49Q9H6J7 331 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 RNF121Q9H920 327 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 TLR9Q9NR96 1032 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SERTAD3Q9UJW9 196 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 ADH1BP00325 375 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 DCKP27707 260 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 GDI1P31150 447 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 MVKQ03426 396 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 TMIGD1Q6UXZ0 262 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 ZDHHC14Q8IZN3 488 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 AURKBQ96GD4 344 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 LRIG1Q96JA1 1093 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF641Q96N77 438 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 MND1Q9BWT6 205 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 B3GAT2Q9NPZ5 323 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 FAM172BPA6NC97 362 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PSKH1P11801 424 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 RPS24P62847 133 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CRTC2Q53ET0 693 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PLEKHS1Q5SXH7 462 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF613Q6PF04 617 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CEACAM20Q6UY09 585 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CILP2Q8IUL8 1156 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 MMAAQ8IVH4 418 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 C7orf61Q8IZ16 206 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SLC22A15Q8IZD6 547 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 FAM46DQ8NEK8 389 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 LPIN3Q9BQK8 851 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 BTBD1Q9H0C5 482 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 POPDC3Q9HBV1 291 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF639Q9UID6 485 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 NIPSNAP2O75323 286 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 AOC1P19801 751 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 RYKP34925 604 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 EEFSECP57772 596 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 TNFAIP8L2Q6P589 184 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 TUBA3EQ6PEY2 450 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SATL1Q86VE3 508 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 C10orf82Q8WW14 230 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SIPA1Q96FS4 1042 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 Q9N2J8 555 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PNO1Q9NRX1 252 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PRAMEF33A0A0G2JMD5 474 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 FAM159BA6NKW6 160 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 UPK3BL1B0FP48 263 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 UPK3BL2E5RIL1 263 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 NOBOXO60393 691 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PRAMEF10O60809 474 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CSTBP04080 98 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 H1F0P07305 194 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 FECHP22830 423 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 YAP1P46937 504 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 MLLT6P55198 1093 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SLC25A11Q02978 314 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CSTF1Q05048 431 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CRHR2Q13324 411 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SLC9A4Q6AI14 798 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 GDF6Q6KF10 455 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PGBD2Q6P3X8 592 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 LRP10Q7Z4F1 713 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CHCHD4Q8N4Q1 142 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CLEC4CQ8WTT0 213 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF516Q92618 1163 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CDK15Q96Q40 435 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CADM1Q9BY67 442 aaKnown RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CD244Q9BZW8 370 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM248Q9NWD8 314 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 TAS2R9Q9NYW1 312 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 FKBP7Q9Y680 259 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 A0A1W2PQ45 241 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 A0A1W2PQY0 241 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 HAS3O00219 553 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 KLF11O14901 512 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SNX4O95219 450 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 NCK1P16333 377 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 CSTF2P33240 577 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 AQP4P55087 323 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 GDF10P55107 478 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 IRF9Q00978 393 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 MXD1Q05195 221 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SP140Q13342 867 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 GPR68Q15743 365 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms