RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MSANTD2Q6P1R3 559 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 ZNF599Q96NL3 588 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.34■□□□□ 0.53
HOXC6-202ENST00000394331 SCML2Q9UQR0 700 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 CXCR6O00574 342 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 PPP6CO00743 305 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 RECQL5O94762 991 aaPredicted RBP18.34■□□□□ 0.53
HOXC6-202ENST00000394331 PRLP01236 227 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 APH1BQ8WW43 257 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 FAM162AQ96A26 154 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 ZYG11BQ9C0D3 744 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 HEBP1Q9NRV9 189 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 A0A0B4J293 547 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 ELOVL7A1L3X0 281 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 ATF4P18848 351 aaPredicted RBP18.33■□□□□ 0.53
HOXC6-202ENST00000394331 RGS6P49758 472 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 DAPP51397 102 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 PON2Q15165 354 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 GALNT5Q7Z7M9 940 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 CYP4Z2PQ8N1L4 340 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 CDYL2Q8N8U2 506 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 PTERQ96BW5 349 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 RNF31Q96EP0 1072 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 MMP28Q9H239 520 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 OR51E2Q9H255 320 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 FBXO44Q9H4M3 255 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 AASSQ9UDR5 926 aa18.33■□□□□ 0.53
HOXC6-202ENST00000394331 MRPL42Q9Y6G3 142 aaKnown RBP18.33■□□□□ 0.53
HOXC6-202ENST00000394331 LOC100506127A0A0U1RQW1 187 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 NT5C1B-RDH14C9J2C7 533 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 CDK1P06493 297 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 CD86P42081 329 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 TBX4P57082 545 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 SLC39A12Q504Y0 691 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF789Q5FWF6 425 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 NOMO2Q5JPE7 1267 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 SLC35F1Q5T1Q4 408 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 RAP1GAP2Q684P5 730 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 TMEM207Q6UWW9 146 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 SNX20Q7Z614 316 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF675Q8TD23 568 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 ELMO1Q92556 727 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 SP110Q9HB58 689 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 SCN10AQ9Y5Y9 1956 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 TFECO14948 347 aaPredicted RBP18.33■□□□□ 0.52
HOXC6-202ENST00000394331 IFI30P13284 250 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 CD1DP15813 335 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 ARHGDIAP52565 204 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 DSTNP60981 165 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.33■□□□□ 0.52
HOXC6-202ENST00000394331 ANGPT1Q15389 498 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 FAM214AQ32MH5 1076 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 TMEM65Q6PI78 240 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 CILP2Q8IUL8 1156 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 AP2M1Q96CW1 435 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 HMCESQ96FZ2 354 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 CRELD1Q96HD1 420 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 PRDM5Q9NQX1 630 aaPredicted RBP18.33■□□□□ 0.52
HOXC6-202ENST00000394331 OLA1Q9NTK5 396 aaKnown RBP18.33■□□□□ 0.52
HOXC6-202ENST00000394331 TMEM248Q9NWD8 314 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 MUTYHQ9UIF7 546 aa18.33■□□□□ 0.52
HOXC6-202ENST00000394331 A0A1W2PQ09 198 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 VPS26AO75436 327 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 PDE9AO76083 593 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 CCNYL3P0C7X3 344 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 ICAM2P13598 275 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 HOXA9P31269 272 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 TEKQ02763 1124 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF79Q15937 498 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 BAK1Q16611 211 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 GPR158Q5T848 1215 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 KRT73Q86Y46 540 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 PMEPA1Q969W9 287 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 MFSD1Q9H3U5 465 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 ING3Q9NXR8 418 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 ELF5Q9UKW6 265 aaPredicted RBP18.32■□□□□ 0.52
HOXC6-202ENST00000394331 SLC22A5O76082 557 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 OR4Q2P0C623 313 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 SLC10A7Q0GE19 358 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 KIF18BQ86Y91 864 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 LURAP1LQ8IV03 231 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 CCDC71Q8IV32 467 aaPredicted RBP18.32■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF683Q8IZ20 524 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 DNASE1L2Q92874 299 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 PABPC5Q96DU9 382 aaKnown RBP18.32■□□□□ 0.52
HOXC6-202ENST00000394331 FUBP3Q96I24 572 aaKnown RBP eCLIP18.32■□□□□ 0.52
HOXC6-202ENST00000394331 COL21A1Q96P44 957 aa18.32■□□□□ 0.52
HOXC6-202ENST00000394331 EVLQ9UI08 416 aaPredicted RBP18.32■□□□□ 0.52
HOXC6-202ENST00000394331 J3KR12 359 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 KIAA0513O60268 411 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 UROSP10746 265 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 CYBAP13498 195 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 CYP4B1P13584 511 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 MTHFD2P13995 350 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 MAXP61244 160 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 RIN1Q13671 783 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 FNDC5Q8NAU1 212 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 OR6P1Q8NGX9 317 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 CSNK1G3Q9Y6M4 447 aa18.31■□□□□ 0.52
HOXC6-202ENST00000394331 MROH6A6NGR9 719 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms