RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ERVK-10P10266 1014 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 PAMP19021 973 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 SLC1A2P43004 574 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 GLRBP48167 497 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 SARNPP82979 210 aaKnown RBP15.81■□□□□ 0.12
PTPRK-208ENST00000392449 MPP1Q00013 466 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 PRTGQ2VWP7 1150 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 TUBB8Q3ZCM7 444 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 CRB2Q5IJ48 1285 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 Q6ZS92 163 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 LAPTM4BQ86VI4 370 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 PAQR7Q86WK9 346 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 RASGEF1CQ8N431 466 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 SMPDL3AQ92484 453 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 CABS1Q96KC9 395 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 PLCD4Q9BRC7 762 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 SLC29A3Q9BZD2 475 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 INTS10Q9NVR2 710 aaKnown RBP15.81■□□□□ 0.12
PTPRK-208ENST00000392449 PLEKHB1Q9UF11 243 aaPredicted RBP15.81■□□□□ 0.12
PTPRK-208ENST00000392449 RUVBL1Q9Y265 456 aaKnown RBP15.81■□□□□ 0.12
PTPRK-208ENST00000392449 NEU2Q9Y3R4 380 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 PCDHGA10Q9Y5H3 936 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 SDR42E2A6NKP2 422 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 PFDN6O15212 129 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 IPO13O94829 963 aaKnown RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 CBX6O95503 412 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 SYF2O95926 243 aaKnown RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 CATP04040 527 aaKnown RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 ZGLP1P0C6A0 271 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 COILP38432 576 aaPredicted RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 PNLIPRP1P54315 467 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 THOC5Q13769 683 aaKnown RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 ICE2Q659A1 982 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 CCDC137Q6PK04 289 aaKnown RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 PLD3Q8IV08 490 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 SHISA5Q8N114 240 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 CSNK1A1LQ8N752 337 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 COG1Q8WTW3 980 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 ZNF480Q8WV37 535 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 MIEF2Q96C03 454 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 THOC3Q96J01 351 aaKnown RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 ZNF160Q9HCG1 818 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 CUEDC1Q9NWM3 386 aaPredicted RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 NXT1Q9UKK6 140 aaKnown RBP15.8■□□□□ 0.12
PTPRK-208ENST00000392449 MAD1L1Q9Y6D9 718 aa15.8■□□□□ 0.12
PTPRK-208ENST00000392449 CNTRLQ7Z7A1 2325 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 P2RX6O15547 441 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 FBLP22087 321 aaKnown RBP15.79■□□□□ 0.12
PTPRK-208ENST00000392449 C4orf17Q53FE4 359 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 FAAH2Q6GMR7 532 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 LINC00696Q6ZRV3 163 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 PIWIL4Q7Z3Z4 852 aaKnown RBP15.79■□□□□ 0.12
PTPRK-208ENST00000392449 CPNE9Q8IYJ1 553 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 MCUQ8NE86 351 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 TM9SF4Q92544 642 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 CNDP1Q96KN2 507 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 GPR21Q99679 349 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 WDR77Q9BQA1 342 aaPredicted RBP15.79■□□□□ 0.12
PTPRK-208ENST00000392449 YIPF2Q9BWQ6 316 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 FAM114A2Q9NRY5 505 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 SEMA3GQ9NS98 782 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 C20orf96Q9NUD7 363 aaPredicted RBP15.79■□□□□ 0.12
PTPRK-208ENST00000392449 ZNF282Q9UDV7 671 aaPredicted RBP15.79■□□□□ 0.12
PTPRK-208ENST00000392449 ERRFI1Q9UJM3 462 aaPredicted RBP15.79■□□□□ 0.12
PTPRK-208ENST00000392449 C3orf18Q9UK00 162 aa15.79■□□□□ 0.12
PTPRK-208ENST00000392449 NOVA2Q9UNW9 492 aaKnown RBP15.79■□□□□ 0.12
PTPRK-208ENST00000392449 COPG1Q9Y678 874 aaKnown RBP15.79■□□□□ 0.12
PTPRK-208ENST00000392449 E7ENX8 843 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 SMAPO00193 183 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 HAT1O14929 419 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 BANF1O75531 89 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 MLNP12872 115 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 MAGEA3P43357 314 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 TAP2Q03519 686 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 OCA2Q04671 838 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 CYP1B1Q16678 543 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 SYT16Q17RD7 645 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 MUM1Q2TAK8 710 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 AGAP7PQ5VUJ5 663 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 ZNF425Q6IV72 752 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 PRMT9Q6P2P2 845 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 CYHR1Q6ZMK1 362 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 ADCK2Q7Z695 626 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 AMER3Q8N944 861 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 NAT8LQ8N9F0 302 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 CD200R1Q8TD46 325 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 ASB11Q8WXH4 323 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 NACC2Q96BF6 587 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 AGAP4Q96P64 663 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 OR2A5Q96R48 311 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 LHPPQ9H008 270 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 XAB2Q9HCS7 855 aaKnown RBP15.78■□□□□ 0.12
PTPRK-208ENST00000392449 TRPC4Q9UBN4 977 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 PCYOX1Q9UHG3 505 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 MRPS2Q9Y399 296 aaKnown RBP15.78■□□□□ 0.12
PTPRK-208ENST00000392449 KLHL18O94889 574 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 HAUS5O94927 633 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 CELA2AP08217 269 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 ACPPP15309 386 aa15.78■□□□□ 0.12
PTPRK-208ENST00000392449 EFNA3P52797 238 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms