RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 RERGQ96A58 199 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-202ENST00000381208 MIEF2Q96C03 454 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 SNRNP40Q96DI7 357 aaKnown RBP12.4□□□□□ -0.42
RPAIN-202ENST00000381208 PLCD4Q9BRC7 762 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 CRB3Q9BUF7 120 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 PPP2R2CQ9Y2T4 447 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 PCDHGA10Q9Y5H3 936 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 HS3ST3B1Q9Y662 390 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 COPG1Q9Y678 874 aaKnown RBP12.4□□□□□ -0.42
RPAIN-202ENST00000381208 POLEQ07864 2286 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 IGLV3-12A0A075B6K2 115 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 GOLGA6L10A0A0M3HER8 536 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 CYSRT1A8MQ03 144 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 MAP2K7O14733 419 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 ZBTB14O43829 449 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 HPP00738 406 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 EIF2S1P05198 315 aaKnown RBP12.39□□□□□ -0.43
RPAIN-202ENST00000381208 ZGLP1P0C6A0 271 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 MPC1LP0DKB6 136 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 EZRP15311 586 aaKnown RBP12.39□□□□□ -0.43
RPAIN-202ENST00000381208 HRH2P25021 359 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 PSMB5P28074 263 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 OR1D4P47884 311 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 CLCN7P51798 805 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 PNLIPRP1P54315 467 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 CYP1B1Q16678 543 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 PRTGQ2VWP7 1150 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 ACSBG2Q5FVE4 666 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 B3GNTL1Q67FW5 361 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-202ENST00000381208 UGT3A1Q6NUS8 523 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 CAND1Q86VP6 1230 aaKnown RBP12.39□□□□□ -0.43
RPAIN-202ENST00000381208 STT3BQ8TCJ2 826 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 ZNF669Q96BR6 464 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-202ENST00000381208 TRIM44Q96DX7 344 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-202ENST00000381208 CABS1Q96KC9 395 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 SOX17Q9H6I2 414 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-202ENST00000381208 SLC24A3Q9HC58 644 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 C14orf105Q9NVL8 296 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 LUZP4Q9P127 313 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 CTSFQ9UBX1 484 aa12.39□□□□□ -0.43
RPAIN-202ENST00000381208 RUVBL2Q9Y230 463 aaKnown RBP12.39□□□□□ -0.43
RPAIN-202ENST00000381208 H0YGG7 62 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 PGRMC1O00264 195 aaKnown RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 AVILO75366 819 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 CBX6O95503 412 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 ANXA5P08758 320 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 ACPPP15309 386 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 FBLP22087 321 aaKnown RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 CXCR2P25025 360 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 COILP38432 576 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 MAGEA3P43357 314 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 FNTAP49354 379 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 ARF3P61204 181 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 CCZ1BP86790 482 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 FASTKQ14296 549 aaKnown RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 NDUFA9Q16795 377 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 LONRF1Q17RB8 773 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 PRR30Q53SZ7 412 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 ICE2Q659A1 982 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 FRMPD2BQ6IN97 320 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 ZNF425Q6IV72 752 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 FBXO42Q6P3S6 717 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 CCDC137Q6PK04 289 aaKnown RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 PAQR7Q86WK9 346 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 REXO1L1PQ8IX06 675 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 CISD2Q8N5K1 135 aaKnown RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 CSNK1A1LQ8N752 337 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 OR11G2Q8NGC1 345 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 ASB11Q8WXH4 323 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 INPP5DQ92835 1189 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 SERPINB12Q96P63 405 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 LMF1Q96S06 567 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 PKP4Q99569 1192 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 BARD1Q99728 777 aaKnown RBP12.38□□□□□ -0.43
RPAIN-202ENST00000381208 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 ACAT2Q9BWD1 397 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 PCBD2Q9H0N5 130 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 C3orf18Q9UK00 162 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 DHRS7Q9Y394 339 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 MAU2Q9Y6X3 613 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 PCM1Q15154 2024 aa12.38□□□□□ -0.43
RPAIN-202ENST00000381208 DOPEY1Q5JWR5 2465 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 CCDC88CQ9P219 2028 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 LOC105369274A0A096LPK9 316 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 LOC102723532A0A0G2JNH3 316 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 ZCWPW2A0A1B0GU75 182 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 GFYI3L273 518 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 SLC16A8O95907 504 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 CYC1P08574 325 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 SKIV2L2P42285 1042 aaKnown RBP12.37□□□□□ -0.43
RPAIN-202ENST00000381208 TSFMP43897 325 aaKnown RBP12.37□□□□□ -0.43
RPAIN-202ENST00000381208 GLRBP48167 497 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 RGS4P49798 205 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 KLC1Q07866 573 aa12.37□□□□□ -0.43
RPAIN-202ENST00000381208 TSTA3Q13630 321 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-202ENST00000381208 PTK6Q13882 451 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms