RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 SLC46A2Q9BY10 475 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 SIRT5Q9NXA8 310 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 ERVK-11Q9UQG0 969 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 FGF18O76093 207 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 IGSF6O95976 241 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 EPB42P16452 691 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 ACVR2AP27037 513 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 RGS4P49798 205 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF648Q5T619 568 aaPredicted RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 ATG9BQ674R7 924 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 Q6ZVU0 165 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 ZBTB2Q8N680 514 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 HPS1Q92902 700 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 VWCEQ96DN2 955 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF300Q96RE9 604 aaPredicted RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 SH3GL1Q99961 368 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 LINC00597Q9H2U6 94 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 MBD1Q9UIS9 605 aaPredicted RBP15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 PCDHB1Q9Y5F3 818 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 GMPPBQ9Y5P6 360 aa15.79■□□□□ 0.12
NKX3-1-201ENST00000380871 HOXA9P31269 272 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 ZCCHC8Q6NZY4 707 aaKnown RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 CHST14Q8NCH0 376 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 DYNC2LI1Q8TCX1 351 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 USP7Q93009 1102 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 APIPQ96GX9 242 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 PAWRQ96IZ0 340 aaKnown RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 EPS8L2Q9H6S3 715 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 PDP1Q9P0J1 537 aaPredicted RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 RBMX2Q9Y388 322 aaKnown RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 LEFTY2O00292 366 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 AQP9O43315 295 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 FZD6O60353 706 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 GREM1O60565 184 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 COQ9O75208 318 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 GNRH1P01148 92 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 SDC1P18827 310 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 KRT20P35900 424 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 AP1S1P61966 158 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 MAD2L1Q13257 205 aaPredicted RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 PLPP4Q5VZY2 271 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 LRRC66Q68CR7 880 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 AHSA2Q719I0 299 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 TCEAL8Q8IYN2 117 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 SELENOMQ8WWX9 145 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 TRMT2BQ96GJ1 504 aaKnown RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF641Q96N77 438 aaPredicted RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 WDR12Q9GZL7 423 aaKnown RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 MAGIXQ9H6Y5 334 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 MAGEE1Q9HCI5 957 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF451Q9Y4E5 1061 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 A0A1W2PQ67 120 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 RECQL5O94762 991 aaPredicted RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 ITGAMP11215 1152 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 HOXB9P17482 250 aaPredicted RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 TGM1P22735 817 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 SERPINA4P29622 427 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 TMED10P49755 219 aaKnown RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 NTHL1P78549 312 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 SLC13A2Q13183 592 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 SYT16Q17RD7 645 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 GPRC6AQ5T6X5 926 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 RBFAQ8N0V3 343 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 REXO5Q96IC2 774 aaKnown RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 KCNH6Q9H252 994 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 DUSP21Q9H596 190 aa15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 PAK6Q9NQU5 681 aaPredicted RBP15.78■□□□□ 0.12
NKX3-1-201ENST00000380871 A8MU76 341 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 RFXANKO14593 260 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 STK16O75716 305 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 DGKAP23743 735 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 HLA-FP30511 346 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 LRIF1Q5T3J3 769 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 OR2T5Q6IEZ7 315 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 DPY19L3Q6ZPD9 716 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 PAGE2Q7Z2X7 111 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 TMEM132CQ8N3T6 1108 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 OR2T29Q8NH02 315 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 CDC26Q8NHZ8 85 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 CYB5D2Q8WUJ1 264 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 ZNF566Q969W8 418 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 APOLD1Q96LR9 279 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 AMBNQ9NP70 447 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 ATAD3AQ9NVI7 634 aa15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 KIAA1522Q9P206 1035 aaPredicted RBP15.77■□□□□ 0.12
NKX3-1-201ENST00000380871 A0A096LPI6 279 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 TRAV19A0A0A6YYK7 116 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 SLC22A1O15245 554 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 FAM20BO75063 409 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 EBLN1P0CF75 366 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 CCR2P41597 374 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 MAGEA2P43356 314 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 MVKQ03426 396 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 CAPN13Q6MZZ7 669 aaPredicted RBP15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 SNX20Q7Z614 316 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 SLC22A16Q86VW1 577 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 TTC29Q8NA56 475 aaPredicted RBP15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 KREMEN2Q8NCW0 462 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 OR52E4Q8NGH9 312 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 OR6Q1Q8NGQ2 317 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms