RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 KCNJ9Q92806 393 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 ZNF501Q96CX3 271 aaPredicted RBP13.27□□□□□ -0.29
PRPF18-202ENST00000378572 NDNQ99608 321 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 OLFM1Q99784 485 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 HGH1Q9BTY7 390 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 KLHL25Q9H0H3 589 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 CAB39LQ9H9S4 337 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 KCNK9Q9NPC2 374 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 GNPTGQ9UJJ9 305 aa13.27□□□□□ -0.29
PRPF18-202ENST00000378572 A0A087X1B8 175 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 OR1I1O60431 355 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 SPAG7O75391 227 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 RECKO95980 971 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 SLC35E2BP0CK96 405 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 ATP1B2P14415 290 aaPredicted RBP13.26□□□□□ -0.29
PRPF18-202ENST00000378572 FMO4P31512 558 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 PRLHRP49683 370 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 MPP2Q14168 576 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 CTSL3PQ5NE16 218 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 CEP97Q8IW35 865 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 CARFQ8N187 725 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 CPT1CQ8TCG5 803 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 DENND1AQ8TEH3 1009 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 ING2Q9H160 280 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 COG4Q9H9E3 785 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 ACTR5Q9H9F9 607 aaPredicted RBP13.26□□□□□ -0.29
PRPF18-202ENST00000378572 NKIRAS1Q9NYS0 192 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 TAS2R13Q9NYV9 303 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 POMT2Q9UKY4 750 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 BTRCQ9Y297 605 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 MED16Q9Y2X0 877 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 ACOT9Q9Y305 439 aa13.26□□□□□ -0.29
PRPF18-202ENST00000378572 TNRC6AQ8NDV7 1962 aaKnown RBP13.26□□□□□ -0.29
PRPF18-202ENST00000378572 BLACEA4D250 179 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 F8W8V4 182 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 MEN1O00255 615 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 QSOX1O00391 747 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 POLR3GO15318 223 aaPredicted RBP13.25□□□□□ -0.29
PRPF18-202ENST00000378572 AP2A2O94973 939 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 AGFG2O95081 481 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 GP1BBP13224 206 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 SKIV2L2P42285 1042 aaKnown RBP13.25□□□□□ -0.29
PRPF18-202ENST00000378572 CDKN2DP55273 166 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 TUBB8Q3ZCM7 444 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 RAPH1Q70E73 1250 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 TCP10LQ8TDR4 215 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 LINC00615Q96LM1 132 aaPredicted RBP13.25□□□□□ -0.29
PRPF18-202ENST00000378572 IQCGQ9H095 443 aaKnown RBP13.25□□□□□ -0.29
PRPF18-202ENST00000378572 VPS11Q9H270 941 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 C1GALT1Q9NS00 363 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 IRAK4Q9NWZ3 460 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 LUZP4Q9P127 313 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 GRID1Q9ULK0 1009 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 PLLPQ9Y342 182 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 A6NL46 340 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 C9J4A7 227 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 BTN3A1O00481 513 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 PHGDHO43175 533 aaKnown RBP13.25□□□□□ -0.29
PRPF18-202ENST00000378572 VPS26AO75436 327 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 CHN1P15882 459 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 SAT1P21673 171 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 RPA3P35244 121 aaPredicted RBP13.25□□□□□ -0.29
PRPF18-202ENST00000378572 UQCRFS1P47985 274 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 TIAL1Q01085 375 aaKnown RBP eCLIP13.25□□□□□ -0.29
PRPF18-202ENST00000378572 ABRQ12979 859 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 PRKG2Q13237 762 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 TSNAXIP1Q2TAA8 658 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 PTCHD3Q3KNS1 767 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 NADK2Q4G0N4 442 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 FAM69BQ5VUD6 431 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 CAPRIN2Q6IMN6 1127 aaKnown RBP13.25□□□□□ -0.29
PRPF18-202ENST00000378572 UGT3A1Q6NUS8 523 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 SYTL1Q8IYJ3 562 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 DSELQ8IZU8 1212 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 SLC38A9Q8NBW4 561 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 OR52E1Q8NGJ3 308 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 OR1L3Q8NH93 324 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 XKR8Q9H6D3 395 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 SYTL2Q9HCH5 934 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 GPAMQ9HCL2 828 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 LATS2Q9NRM7 1088 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 KLHL42Q9P2K6 505 aa13.25□□□□□ -0.29
PRPF18-202ENST00000378572 C2orf74A8MZ97 194 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 E7EQ34 232 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 OR56A5P0C7T3 313 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 PVRP15151 417 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 ST6GAL1P15907 406 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 GNLYP22749 145 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 MDH1P40925 334 aaKnown RBP13.24□□□□□ -0.29
PRPF18-202ENST00000378572 ETV4P43268 484 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 SYTL3Q4VX76 610 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 PTRHD1Q6GMV3 140 aaKnown RBP13.24□□□□□ -0.29
PRPF18-202ENST00000378572 CDHR3Q6ZTQ4 885 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 TBC1D1Q86TI0 1168 aaPredicted RBP13.24□□□□□ -0.29
PRPF18-202ENST00000378572 GPR135Q8IZ08 494 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 CENPLQ8N0S6 344 aaPredicted RBP13.24□□□□□ -0.29
PRPF18-202ENST00000378572 PHC3Q8NDX5 983 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 UBXN10Q96LJ8 280 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 TSNARE1Q96NA8 513 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 PANX3Q96QZ0 392 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms