RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 GLYATQ6IB77 296 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 RFLNAQ6ZTI6 216 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 PAPD5Q8NDF8 572 aaKnown RBP15.08■□□□□ 0
CCDC40-202ENST00000374876 SLC13A3Q8WWT9 602 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 RMND5BQ96G75 393 aaPredicted RBP15.08■□□□□ 0
CCDC40-202ENST00000374876 SEPHS2Q99611 448 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 GPR174Q9BXC1 333 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 DUSP15Q9H1R2 295 aaPredicted RBP15.08■□□□□ 0
CCDC40-202ENST00000374876 CAAP1Q9H8G2 361 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 ACTR8Q9H981 624 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 LRTM1Q9HBL6 345 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 VCX3AQ9NNX9 186 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 SCML1Q9UN30 329 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 GON4LQ3T8J9 2241 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 PABPN1LA6NDY0 278 aaKnown RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 CCDC160A6NGH7 325 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 GMNNO75496 209 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 RASAL1O95294 804 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 KRT6AP02538 564 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 KRT6BP04259 564 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 NELFEP18615 380 aaKnown RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 NBL1P41271 181 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 KRT6CP48668 564 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 HSPA14Q0VDF9 509 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 PLK5Q496M5 336 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 LRRC73Q5JTD7 316 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 CDKL4Q5MAI5 379 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 GDPD4Q6W3E5 623 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 UBE2R2Q712K3 238 aaPredicted RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 RGL4Q8IZJ4 473 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 LIX1Q8N485 282 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 GLB1L3Q8NCI6 653 aaPredicted RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 OR8J3Q8NGG0 315 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 OR14C36Q8NHC7 312 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 SLC29A3Q9BZD2 475 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 DPY30Q9C005 99 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 BTBD1Q9H0C5 482 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 SLC32A1Q9H598 525 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 B4GALT6Q9UBX8 382 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 V9GYQ6 96 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 THADAQ6YHU6 1953 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 C16orf96A6NNT2 1141 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 H3BNH8 94 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 EIF3FO00303 357 aaPredicted RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 NDUFS2O75306 463 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 LDLRP01130 860 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 IGLV3-19P01714 112 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 C1SP09871 688 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 HIST1H2AGP0C0S8 130 aaPredicted RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 HIST1H2ADP20671 130 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 SPINT3P49223 89 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 SH3BGRP55822 239 aaPredicted RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 POLR2LP62875 67 aaKnown RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 SELPLGQ14242 412 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 KIAA0040Q15053 153 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 MAPKAPK3Q16644 382 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 FAM174BQ3ZCQ3 159 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 TTC23LQ6PF05 361 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 USP30Q70CQ3 517 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 ARMCX6Q7L4S7 300 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 DET1Q7L5Y6 550 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 SPRED1Q7Z699 444 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 GALNT13Q8IUC8 556 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 FAM47BQ8NA70 645 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 NMD3Q96D46 503 aaKnown RBP15.07■□□□□ 0
CCDC40-202ENST00000374876 HIST1H2AHQ96KK5 128 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 RNF145Q96MT1 663 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 HIST1H2AJQ99878 128 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 H2AFJQ9BTM1 129 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 ADI1Q9BV57 179 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 DYRK4Q9NR20 520 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 OLAHQ9NV23 265 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 SMOXQ9NWM0 555 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 ZNHIT2Q9UHR6 403 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 PDE10AQ9Y233 779 aa15.07■□□□□ 0
CCDC40-202ENST00000374876 IGLV3-16A0A075B6K0 115 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 A0A1B0GTW7 788 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 A0A1W2PQ67 120 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 PRR23AA6NEV1 266 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 PLOD2O00469 737 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 IL6P05231 212 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 C8GP07360 202 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 AOAHP28039 575 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 MERTKQ12866 999 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 CPSF6Q16630 551 aaKnown RBP eCLIP15.06■□□□□ 0
CCDC40-202ENST00000374876 ZNF805Q5CZA5 627 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 TCAIMQ8N3R3 496 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 TRIML2Q8N7C3 387 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 USP7Q93009 1102 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 MTFMTQ96DP5 389 aaKnown RBP15.06■□□□□ 0
CCDC40-202ENST00000374876 LRIG1Q96JA1 1093 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 CHID1Q9BWS9 393 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 C6orf106Q9H6K1 298 aaPredicted RBP15.06■□□□□ 0
CCDC40-202ENST00000374876 PARVBQ9HBI1 364 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 C1orf109Q9NX04 203 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.06■□□□□ 0
CCDC40-202ENST00000374876 CD84Q9UIB8 345 aa15.06■□□□□ 0
CCDC40-202ENST00000374876 DLGAP1O14490 977 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 VILLO15195 856 aa15.05■□□□□ 0
CCDC40-202ENST00000374876 ACOX3O15254 700 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms