RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ADGRG6Q86SQ4 1221 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 TRAM1L1Q8N609 369 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 ACVR1CQ8NER5 493 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 RUNDC3BQ96NL0 473 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 CIB1Q99828 191 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 DPH7Q9BTV6 452 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 NUF2Q9BZD4 464 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 SCPEP1Q9HB40 452 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 NINJ2Q9NZG7 142 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 ZNF212Q9UDV6 495 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 GPN3Q9UHW5 284 aaPredicted RBP6.82□□□□□ -1.32
USP1-202ENST00000371146 PTPRSQ13332 1948 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 TICRRQ7Z2Z1 1910 aa6.82□□□□□ -1.32
USP1-202ENST00000371146 PMS2P1A4D2B8 440 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 LRRC14BA6NHZ5 514 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CASQ2O14958 399 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 FLRT2O43155 660 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 ALOX12BO75342 701 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 MT-CO3P00414 261 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CR2P20023 1033 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CXCR2P25025 360 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 STX2P32856 288 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CBX5P45973 191 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 IRF9Q00978 393 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 PUM1Q14671 1186 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP1-202ENST00000371146 FAM83EQ2M2I3 478 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 RNASEH2BQ5TBB1 312 aaKnown RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 UGT3A1Q6NUS8 523 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 MACC1Q6ZN28 852 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 ZFAND4Q86XD8 727 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CADM4Q8NFZ8 388 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 INTS12Q96CB8 462 aaKnown RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 MMABQ96EY8 250 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 PPP1R2P1Q96PQ5 205 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 MFRPQ9BY79 579 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 USP36Q9P275 1121 aaKnown RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 FBXW2Q9UKT8 454 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 ASPMQ8IZT6 3477 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 MED19A0JLT2 244 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 A6NCN8 305 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 ANKDD1BA6NHY2 528 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 UBXN8O00124 270 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 TRAFD1O14545 582 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 ALOX15BO15296 676 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CFLARO15519 480 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 NUAK1O60285 661 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 KLHL41O60662 606 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 TMCC2O75069 709 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 GPC4O75487 556 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 WFS1O76024 890 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 SEC24DO94855 1032 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 KCNK5O95279 499 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CPNE6O95741 557 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 TGFB1P01137 390 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 TCN2P20062 427 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CFL1P23528 166 aaKnown RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 PRKAR1BP31321 381 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CCR7P32248 378 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 GP5P40197 560 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 PGDP52209 483 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 N4BP2L1Q5TBK1 243 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 FAM219BQ5XKK7 198 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 PRICKLE2Q7Z3G6 844 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 KIAA0907Q7Z7F0 614 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 AMIGO1Q86WK6 493 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 C17orf64Q86WR6 236 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 CDYL2Q8N8U2 506 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 SUMF1Q8NBK3 374 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 DUSP23Q9BVJ7 150 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 COG4Q9H9E3 785 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 THAP1Q9NVV9 213 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 ANKRD10Q9NXR5 420 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 SCOCQ9UIL1 159 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 KLK13Q9UKR3 277 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 MYO16Q9Y6X6 1858 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 MPDZO75970 2070 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 A0A1W2PPM1 405 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 MASP2O00187 686 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 RTCAO00442 366 aaKnown RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 HTRA2O43464 458 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 CYP7B1O75881 506 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 UBXN7O94888 489 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 SLC16A8O95907 504 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 ABCB1P08183 1280 aaPredicted RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 BRAFP15056 766 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 TMED10P49755 219 aaKnown RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 ERFP50548 548 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 RPS18P62269 152 aaKnown RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 TUBB3Q13509 450 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 PEX6Q13608 980 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 PCBP2Q15366 365 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP1-202ENST00000371146 CNPY1Q3B7I2 92 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 ANKS6Q68DC2 871 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 TMC3Q7Z5M5 1100 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 PTRH1Q86Y79 214 aaKnown RBP6.81□□□□□ -1.32
USP1-202ENST00000371146 FAM217AQ8IXS0 508 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 DSELQ8IZU8 1212 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 NAGSQ8N159 534 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 OXR1Q8N573 874 aa6.81□□□□□ -1.32
USP1-202ENST00000371146 OR52E1Q8NGJ3 308 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms