RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SIGLEC10Q96LC7 697 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 TMEM74Q96NL1 305 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 GAL3ST1Q99999 423 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 DERL2Q9GZP9 239 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 MMP27Q9H306 513 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 SAP18O00422 153 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 CAPN15O75808 1086 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 AGR2O95994 175 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 HK1P19367 917 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 ARSFP54793 590 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 DNAJB13P59910 316 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 FKBP1BP68106 108 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 EMX2Q04743 252 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 EIF5AL1Q6IS14 154 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 RPL10LQ96L21 214 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 ZNF304Q9HCX3 659 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 TRIM36Q9NQ86 728 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 ALG5Q9Y673 324 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 DNASE1L3Q13609 305 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 ACDQ96AP0 544 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 FAM120CQ9NX05 1096 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 H0YAE9 185 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 G6PDP11413 515 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 RASGEF1BQ0VAM2 473 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 TGFBIQ15582 683 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 ANKDD1AQ495B1 522 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 ARL9Q6T311 187 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 NUP54Q7Z3B4 507 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 C1orf52Q8N6N3 182 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 ATP6V1C2Q8NEY4 427 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 OR14C36Q8NHC7 312 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 METTL21AQ8WXB1 218 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 HSH2DQ96JZ2 352 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 BCAS3Q9H6U6 928 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 TLX3O43711 291 aaPredicted RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 UBXN7O94888 489 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 MAP3K8P41279 467 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CAP1Q01518 475 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 ZNF45Q02386 682 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 TCEAL1Q15170 157 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 ZNF431Q8TF32 576 aaPredicted RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 TSPEARQ8WU66 669 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 HTATIP2Q9BUP3 242 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 BRD7Q9NPI1 651 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 SLC2A6Q9UGQ3 507 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 MANBAO00462 879 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 RASGRP1O95267 797 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 FAM163BP0C2L3 166 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CCR8P51685 355 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 MINDY4Q4G0A6 757 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 ATAT1Q5SQI0 421 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 PLPP4Q5VZY2 271 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 LRP10Q7Z4F1 713 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 FAM129BQ96TA1 746 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 MRPS30Q9NP92 439 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 LYARQ9NX58 379 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 ZNF69Q9UC07 566 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CMAHPQ9Y471 501 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CDC7O00311 574 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CCL16O15467 120 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CBSLP0DN79 551 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 FUT4P22083 530 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CBSP35520 551 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 RPL19P84098 196 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 ZNF33AQ06730 810 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 PUM1Q14671 1186 aaKnown RBP eCLIP14.47□□□□□ -0.094e-7■■□□□ 13.9
CHD4-201ENST00000357008 SNAP47Q5SQN1 464 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CCSAPQ6IQ19 270 aaPredicted RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 PIM3Q86V86 326 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 KIAA1191Q96A73 305 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 TWNKQ96RR1 684 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 BARD1Q99728 777 aaKnown RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 CCDC106Q9BWC9 280 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 TRPV4Q9HBA0 871 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 CHMP1AQ9HD42 196 aaPredicted RBP14.47□□□□□ -0.09
CHD4-201ENST00000357008 PRELID1Q9Y255 219 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 PCDHGB6Q9Y5F9 930 aa14.47□□□□□ -0.09
CHD4-201ENST00000357008 DUSP11O75319 330 aaKnown RBP14.46□□□□□ -0.09
CHD4-201ENST00000357008 DNAJB5O75953 348 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 TGFB1P01137 390 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 CLCN7P51798 805 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 CDKL1Q00532 357 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 ZNF627Q7L945 461 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 GOLGA7Q7Z5G4 137 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 AMZ2Q86W34 360 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 TMEM17Q86X19 198 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 AQP11Q8NBQ7 271 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 TMIEQ8NEW7 156 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 NDC1Q9BTX1 674 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 HEBP2Q9Y5Z4 205 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 LCHNA4D1U4 455 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 DLGAP1O14490 977 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 SNAPC5O75971 98 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 RCBTB2O95199 551 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 F7P08709 466 aaPredicted RBP14.46□□□□□ -0.09
CHD4-201ENST00000357008 FGF3P11487 239 aaPredicted RBP14.46□□□□□ -0.09
CHD4-201ENST00000357008 ZNF182P17025 639 aaPredicted RBP14.46□□□□□ -0.09
CHD4-201ENST00000357008 ALAS2P22557 587 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 TIGD5Q53EQ6 642 aa14.46□□□□□ -0.09
CHD4-201ENST00000357008 TMEM80Q96HE8 168 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms