RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 B3GALT2O43825 422 aa10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 SOX14O95416 240 aa10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 DSC3Q14574 896 aa10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 PRKD1Q15139 912 aaPredicted RBP10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 EMC10Q5UCC4 262 aa10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 CPNE9Q8IYJ1 553 aa10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 ASCC1Q8N9N2 400 aaKnown RBP10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 C9orf43Q8TAL5 461 aaPredicted RBP10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 ZNF641Q96N77 438 aaPredicted RBP10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 KCNQ5Q9NR82 932 aa10.77□□□□□ -0.68
GTF3C1-201ENST00000356183 CAPN14A8MX76 684 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MUSKO15146 869 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 TLR5O60602 858 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 VIPP01282 170 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MRPS6P82932 125 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 DUS1LQ6P1R4 473 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 TMEM53Q6P2H8 277 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 SLC30A8Q8IWU4 369 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 CANT1Q8WVQ1 401 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 OR5B12Q96R08 314 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 NDC1Q9BTX1 674 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MRPL15Q9P015 296 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 TGFB1I1O43294 461 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 RAB4AP20338 218 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 WASP42768 502 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MAP2K4P45985 399 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 ADGRD2Q7Z7M1 963 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 RBM23Q86U06 439 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 PRSS58Q8IYP2 241 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 NRSN1Q8IZ57 195 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 FBRSQ9HAH7 460 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MRPS23Q9Y3D9 190 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 A0A0G2JN53 185 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 HYKKA2RU49 373 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 TLX3O43711 291 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 PCDHGA12O60330 932 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 APOC3P02656 99 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 BCHEP06276 602 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 ERP29P30040 261 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 CAPZA1P52907 286 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 TMEM44Q2T9K0 475 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 OR6C4Q8NGE1 309 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 ISOC1Q96CN7 298 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MTERF1Q99551 399 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 WDR18Q9BV38 432 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 CD320Q9NPF0 282 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MROH2AA6NES4 1674 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 KCNJ13O60928 360 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 SLITRK5O94991 958 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 CBLP22681 906 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 ADH7P40394 386 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 CDKN2BP42772 138 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 SLC1A2P43004 574 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 RABGGTBP53611 331 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 SEC13P55735 322 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 NFE2L1Q14494 772 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 CMPK2Q5EBM0 449 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 OVCA2Q8WZ82 227 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 LIN37Q96GY3 246 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 IKZF4Q9H2S9 585 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 SEC61A2Q9H9S3 476 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MCCC2Q9HCC0 563 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 MAN2C1Q9NTJ4 1040 aa10.77□□□□□ -0.69
GTF3C1-201ENST00000356183 AGAP5A6NIR3 686 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 KHNYNO15037 678 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CCL16O15467 120 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 NR0B1P51843 470 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SMAD3P84022 425 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 LSAMPQ13449 338 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 NOMO2Q5JPE7 1267 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 C9orf57Q5W0N0 161 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 TMEM198Q66K66 360 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 DCLRE1AQ6PJP8 1040 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 NAPRTQ6XQN6 538 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 HSDL2Q6YN16 418 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 C16orf58Q96GQ5 468 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 SLC6A7Q99884 636 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 OR2B2Q9GZK3 357 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 NDUFAF4Q9P032 175 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 AP1M2Q9Y6Q5 423 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 ZNF726A6NNF4 738 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 EEF1E1O43324 174 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 GRIN3BO60391 1043 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 GLUD1P00367 558 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 XRCC1P18887 633 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CORO1AP31146 461 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 LAPTM4AQ15012 233 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PARP15Q460N3 678 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 ZNF404Q494X3 552 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 LRRC73Q5JTD7 316 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CDCA2Q69YH5 1023 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PLD5Q8N7P1 536 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 PHOX2BQ99453 314 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 LRRC3Q9BY71 257 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 C1orf21Q9H246 121 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 TRIM36Q9NQ86 728 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 TAS2R10Q9NYW0 307 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 MGAT4CQ9UBM8 478 aa10.76□□□□□ -0.69
GTF3C1-201ENST00000356183 CNTNAP1P78357 1384 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms