RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 UGT1A5P35504 534 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SPAM1P38567 509 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 ATP6V0D1P61421 351 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 DMTNQ08495 405 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 CCDC15Q0P6D6 951 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 KCNAB2Q13303 367 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 ITGA9Q13797 1035 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SPIDRQ14159 915 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 USP10Q14694 798 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 ACAP2Q15057 778 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 DLG2Q15700 870 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 FAM83EQ2M2I3 478 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 MANEAQ5SRI9 462 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 ATXN7L2Q5T6C5 722 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 AGAP9Q5VTM2 703 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 LRRC8EQ6NSJ5 796 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 UGT3A1Q6NUS8 523 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 CES3Q6UWW8 571 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 GCNT7Q6ZNI0 430 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 DPY19L3Q6ZPD9 716 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SNX20Q7Z614 316 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 ABI3BPQ7Z7G0 1075 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 B3GNT8Q7Z7M8 397 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D1Q86TI0 1168 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 VASH2Q86V25 355 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 CCDC197Q8NCU1 140 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TMIEQ8NEW7 156 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 OR4K2Q8NGD2 314 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 OR2A12Q8NGT7 310 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 OR6Y1Q8NGX8 325 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 OR6P1Q8NGX9 317 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 RHEBL1Q8TAI7 183 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 RAB7BQ96AH8 199 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 VOPP1Q96AW1 172 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 MRRFQ96E11 262 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 DNAJC1Q96KC8 554 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 EXOC2Q96KP1 924 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 UBXN10Q96LJ8 280 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TBATAQ96M53 351 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 FAM111AQ96PZ2 611 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 MRPL57Q9BQC6 102 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TRMOQ9BU70 441 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 PITPNM3Q9BZ71 974 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 GPR63Q9BZJ6 419 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TM6SF2Q9BZW4 377 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 CCDC68Q9H2F9 335 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 MRPL46Q9H2W6 279 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 MANSC1Q9H8J5 431 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 NMRAL1Q9HBL8 299 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SYTL2Q9HCH5 934 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 GPR27Q9NS67 375 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 MRGBPQ9NV56 204 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 THAP1Q9NVV9 213 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 DNAJC28Q9NX36 388 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TAS2R13Q9NYV9 303 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 COPG2Q9UBF2 871 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SLC2A6Q9UGQ3 507 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 HAO1Q9UJM8 370 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TUBD1Q9UJT1 453 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SRPK3Q9UPE1 567 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 VWA7Q9Y334 891 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SPO11Q9Y5K1 396 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 ARL5AQ9Y689 179 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 FBN2P35556 2912 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 C1orf232A0A0U1RR37 186 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 GOLGA8RI6L899 631 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 K7ERQ8 282 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 NTN3O00634 580 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 PRMT5O14744 637 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 CASC3O15234 703 aaKnown RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 SLC31A1O15431 190 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 SPAG7O75391 227 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 PIAS1O75925 651 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 CSF2P04141 144 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 PDHA1P08559 390 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 LTA4HP09960 611 aaKnown RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF37AP17032 561 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF7P17097 686 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 HNRNPA2B1P22626 353 aaKnown RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 GIPRP48546 466 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 STK19P49842 368 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 SEC24CP53992 1094 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 POLE2P56282 527 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 TAS2R38P59533 333 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 DNAJB13P59910 316 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 CYP4F2P78329 520 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 XIAPP98170 497 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 MPP1Q00013 466 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 OCRLQ01968 901 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 ELP6Q0PNE2 266 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 GALNT1Q10472 559 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 CNTN1Q12860 1018 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 NFATC2Q13469 925 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 DEFB133Q30KQ1 61 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF805Q5CZA5 627 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF542PQ5EBM4 170 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 FAM46CQ5VWP2 391 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 ERAP2Q6P179 960 aa6.78□□□□□ -1.32
VPS13A-201ENST00000355766 METTL2BQ6P1Q9 378 aaKnown RBP6.78□□□□□ -1.32
VPS13A-201ENST00000355766 GDPD4Q6W3E5 623 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms