RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FBXO15Q8NCQ5 510 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 CERS2Q96G23 380 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 FAM167BQ9BTA0 163 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 MRPS30Q9NP92 439 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 PDE10AQ9Y233 779 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 RUVBL1Q9Y265 456 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 PADI2Q9Y2J8 665 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 TEX264Q9Y6I9 313 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 ASH1LQ9NR48 2969 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 HYKKA2RU49 373 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 SMAPO00193 183 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 HAT1O14929 419 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 PFDN6O15212 129 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 FKBP9O95302 570 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 CMPK1P30085 196 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 RPA3P35244 121 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 ITGA8P53708 1063 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 ARSFP54793 590 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 GRM7Q14831 915 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 SPANXN3Q5MJ09 141 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 TEDDM1Q5T9Z0 273 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 UBE2R2Q712K3 238 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 MED25Q71SY5 747 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 TMEM102Q8N9M5 508 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 MAGEC3Q8TD91 643 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 FKBP10Q96AY3 582 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 CFAP36Q96G28 342 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 OR2A5Q96R48 311 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 SMAD5Q99717 465 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 OLFM1Q99784 485 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 ZFYVE21Q9BQ24 234 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 TRIM31Q9BZY9 425 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 ZNF552Q9H707 407 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 KLHL42Q9P2K6 505 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 VPS9D1Q9Y2B5 631 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 CSAG2Q9Y5P2 127 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 PSAT1Q9Y617 370 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 HS3ST3B1Q9Y662 390 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 CPAMD8Q8IZJ3 1885 aa15.96■□□□□ 0.15
PDLIM7-201ENST00000355572 SETXQ7Z333 2677 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 CLEC18AA5D8T8 446 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 VSTM2BA6NLU5 285 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 FOXS1O43638 330 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 PIAS1O75925 651 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 SEC31AO94979 1220 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 DR1Q01658 176 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 PRDX1Q06830 199 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 Q0VFX4 171 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 ARHGAP19Q14CB8 494 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 VWA2Q5GFL6 755 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 TCTE1Q5JU00 501 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 STEAP4Q687X5 459 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 SLC6A19Q695T7 634 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 KIRREL2Q6UWL6 708 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 TMEM207Q6UWW9 146 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 CLEC18BQ6UXF7 455 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 LAPTM4BQ86VI4 370 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 ANKMY2Q8IV38 441 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 LMNTD2Q8IXW0 634 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 PRSS58Q8IYP2 241 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 TTC29Q8NA56 475 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 CLEC18CQ8NCF0 446 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 CALML6Q8TD86 181 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 PTERQ96BW5 349 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 NAPGQ99747 312 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 MACROD1Q9BQ69 325 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 SLC26A1Q9H2B4 701 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 CCDC68Q9H2F9 335 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 MRFAP1Q9Y605 127 aa15.95■□□□□ 0.14
PDLIM7-201ENST00000355572 SRPX2O60687 465 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 VPS26AO75436 327 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 ENO3P13929 434 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 RPL21P46778 160 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 TBPL1P62380 186 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 SYT16Q17RD7 645 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 TTLL9Q3SXZ7 439 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 JMJD6Q6NYC1 403 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 VN1R4Q7Z5H5 301 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 RAB42Q8N4Z0 105 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 AMER3Q8N944 861 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 SMYD2Q9NRG4 433 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 FAM114A2Q9NRY5 505 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 GPR83Q9NYM4 423 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 TRMT6Q9UJA5 497 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 FBXL4Q9UKA2 621 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 SAR1BQ9Y6B6 198 aa15.94■□□□□ 0.14
PDLIM7-201ENST00000355572 H7BY64 318 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 AGPSO00116 658 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 MMP11P24347 488 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 KLC1Q07866 573 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 ZNF460Q14592 562 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 MORF4L2Q15014 288 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 PRSS41Q7RTY9 318 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 GALNT16Q8N428 558 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 CSNK1A1LQ8N752 337 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 STT3BQ8TCJ2 826 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 C8orf44Q96CB5 159 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 LINGO1Q96FE5 620 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 CCDC138Q96M89 665 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 PRAP1Q96NZ9 151 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms