RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ACAD11Q709F0 780 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 ARMCX6Q7L4S7 300 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 GHDCQ8N2G8 530 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 FAR1Q8WVX9 515 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 HSD17B8Q92506 261 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 FAM131CQ96AQ9 280 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 CHID1Q9BWS9 393 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 ARNT2Q9HBZ2 717 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 LHX9Q9NQ69 397 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 KCMF1Q9P0J7 381 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 GLOD5A6NK44 160 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 SRRM3A6NNA2 597 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 APOL1O14791 398 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 DAB1O75553 588 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 OLFM2O95897 454 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 LRPAP1P30533 357 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CD70P32970 193 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 RFX2P48378 723 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CLK3P49761 638 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 DAPP51397 102 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 PPP1CAP62136 330 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 HOXA4Q00056 320 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 TRIM25Q14258 630 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 ZMYND11Q15326 602 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ZNF79Q15937 498 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 FAM83EQ2M2I3 478 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ATP13A5Q4VNC0 1218 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 SLC6A19Q695T7 634 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 PRSS41Q7RTY9 318 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 KIF18BQ86Y91 864 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 HID1Q8IV36 788 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 RIMKLAQ8IXN7 391 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 HS6ST3Q8IZP7 471 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CHDHQ8NE62 594 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 ABHD11Q8NFV4 315 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CDADC1Q9BWV3 514 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 KCND2Q9NZV8 630 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 COQ6Q9Y2Z9 468 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CYP11A1P05108 521 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 YWHAEP62258 255 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 KCNC4Q03721 635 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 SPIDRQ14159 915 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 KRT81Q14533 505 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 MAP7D1Q3KQU3 841 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 FAM174BQ3ZCQ3 159 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 IRGCQ6NXR0 463 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 SDCCAG8Q86SQ7 713 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 CLDN22Q8N7P3 220 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ZNF557Q8N988 423 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 KDF1Q8NAX2 398 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 TADA1Q96BN2 335 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 YME1L1Q96TA2 773 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ZNF670Q9BS34 389 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 IER2Q9BTL4 223 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 TPK1Q9H3S4 243 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ETAA1Q9NY74 926 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ZFP37Q9Y6Q3 630 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 FUOMA2VDF0 154 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CARNS1A5YM72 827 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 LSM1O15116 133 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 NDUFB5O43674 189 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 IGSF6O95976 241 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CLPTM1O96005 669 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 VDRP11473 427 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 HLA-FP30511 346 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 GP5P40197 560 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CREMQ03060 361 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 PDK2Q15119 407 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 DBX2Q6ZNG2 339 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 SETD3Q86TU7 594 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 KLHDC8BQ8IXV7 354 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 OR4D9Q8NGE8 314 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ELSPBP1Q96BH3 223 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ACPTQ9BZG2 426 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 RTN4RQ9BZR6 473 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 PAIP1Q9H074 479 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 GLT8D2Q9H1C3 349 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 MVB12BQ9H7P6 319 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CXorf21Q9HAI6 301 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 MRPL47Q9HD33 250 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 TRNAU1APQ9NX07 287 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 POLR3HQ9Y535 204 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 E9PAM4 449 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CHRNB1P11230 501 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 POU3F2P20265 443 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 AZGP1P25311 298 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 JAK3P52333 1124 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ADARB1P78563 741 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 TSPY1Q01534 308 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 SLC36A3Q495N2 470 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 FAM171BQ6P995 826 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 PSTKQ8IV42 348 aaKnown RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 ARHGAP24Q8N264 748 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 ZNF786Q8N393 782 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 HSFY1Q96LI6 401 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 PFDN4Q9NQP4 134 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 SDR39U1Q9NRG7 319 aaPredicted RBP5.43□□□□□ -1.54
CD47-201ENST00000355354 ERVK13-1Q9NX77 482 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 GPR55Q9Y2T6 319 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms