RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PIK3CBP42338 1070 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 IDNKQ5T6J7 187 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 TPRG1Q6ZUI0 275 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 MARVELD2Q8N4S9 558 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 CPA6Q8N4T0 437 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 CRYGNQ8WXF5 182 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 C1QTNF1Q9BXJ1 281 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 CCM2LQ9NUG4 571 aaPredicted RBP13.4□□□□□ -0.26
RTN4-202ENST00000337526 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 KLK1P06870 262 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 H1F0P07305 194 aaKnown RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 PSKH1P11801 424 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 CPN2P22792 545 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 AVPR1BP47901 424 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 NOVP48745 357 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ARFIP1P53367 373 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 TUBA1BP68363 451 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 KCNAB2Q13303 367 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 GPR17Q13304 367 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 CLEC12AQ5QGZ9 265 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 KIAA1161Q6NSJ0 714 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 TUBA1AQ71U36 451 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 COX18Q8N8Q8 333 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 GRPEL2Q8TAA5 225 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ZNF420Q8TAQ5 688 aaPredicted RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 HSH2DQ96JZ2 352 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 CDADC1Q9BWV3 514 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 STRA6Q9BX79 667 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 FAM120CQ9NX05 1096 aaKnown RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 FBXL21Q9UKT6 434 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 TLR4O00206 839 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 DCLK1O15075 740 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 BEST1O76090 585 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 RASGRP1O95267 797 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 MATN4O95460 622 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ATP1B2P14415 290 aaPredicted RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 MPIP34949 423 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 NCBP2P52298 156 aaKnown RBP eCLIP13.39□□□□□ -0.27
RTN4-202ENST00000337526 DGKEP52429 567 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 PRKCZQ05513 592 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ZNF404Q494X3 552 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ADNP2Q6IQ32 1131 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 GET4Q7L5D6 327 aaPredicted RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 NSUN5Q96P11 429 aaKnown RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 YIPF4Q9BSR8 244 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ASB3Q9Y575 518 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 SRPRAP08240 638 aaKnown RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 IGFBP4P22692 258 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 GRB7Q14451 532 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 SEMA3AQ14563 771 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 RAB6CQ53S08 254 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 IQCHQ86VS3 1027 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 SLC15A3Q8IY34 581 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 SCLYQ96I15 445 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 MCCC1Q96RQ3 725 aaPredicted RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 RAB6CQ9H0N0 254 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 POPDC3Q9HBV1 291 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 LRRC72A6NJI9 287 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 DUXAA6NLW8 204 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 MAGEB3O15480 346 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 PRAMEF12O95522 483 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 HMGN1P05114 100 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ALPPP05187 535 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 CBSLP0DN79 551 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 CSNK2A2P19784 350 aaPredicted RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 CBSP35520 551 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 PTGR1Q14914 329 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 SLC30A6Q6NXT4 461 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 TRIM74Q86UV6 250 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 TRIM73Q86UV7 250 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 THOC6Q86W42 341 aaKnown RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 CEP97Q8IW35 865 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 CD99L2Q8TCZ2 262 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 ISOC1Q96CN7 298 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 SLC22A4Q9H015 551 aa13.39□□□□□ -0.27
RTN4-202ENST00000337526 SOX17Q9H6I2 414 aaPredicted RBP13.39□□□□□ -0.27
RTN4-202ENST00000337526 A0A0D9SEW6 157 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 ARVCFO00192 962 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 KDELR3O43731 214 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 AKR1D1P51857 326 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 WNT7BP56706 349 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 MINDY4Q4G0A6 757 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 PRAMEF14Q5SWL7 426 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 PRAMEF13Q5VWM6 474 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 KIAA1614Q5VZ46 1190 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 AGTRAPQ6RW13 159 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 Q6ZVU0 165 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 TSEN15Q8WW01 171 aaKnown RBP13.38□□□□□ -0.27
RTN4-202ENST00000337526 IMP4Q96G21 291 aaKnown RBP13.38□□□□□ -0.27
RTN4-202ENST00000337526 ZNF382Q96SR6 550 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 ZSCAN5AQ9BUG6 496 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 CD244Q9BZW8 370 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 PIGUQ9H490 435 aa13.38□□□□□ -0.27
RTN4-202ENST00000337526 NLE1Q9NVX2 485 aaPredicted RBP13.38□□□□□ -0.27
RTN4-202ENST00000337526 MAT2AP31153 395 aaKnown RBP13.38□□□□□ -0.27
RTN4-202ENST00000337526 NDUFA9Q16795 377 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms