RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 FBXL4Q9UKA2 621 aa16.94■□□□□ 0.3
CMTM1-204ENST00000336328 FBXO5Q9UKT4 447 aa16.94■□□□□ 0.3
CMTM1-204ENST00000336328 NEU2Q9Y3R4 380 aa16.94■□□□□ 0.3
CMTM1-204ENST00000336328 SPTBN1Q01082 2364 aaKnown RBP16.94■□□□□ 0.3
CMTM1-204ENST00000336328 DOCK10Q96BY6 2186 aa16.94■□□□□ 0.3
CMTM1-204ENST00000336328 PRRC2CQ9Y520 2896 aaKnown RBP16.93■□□□□ 0.3
CMTM1-204ENST00000336328 H0YGG7 62 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 GFYI3L273 518 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 KIF5CO60282 957 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 TTC4O95801 387 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 SYF2O95926 243 aaKnown RBP16.93■□□□□ 0.3
CMTM1-204ENST00000336328 CXCR2P25025 360 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 MAGEA3P43357 314 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 RGS4P49798 205 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 ARF3P61204 181 aaPredicted RBP16.93■□□□□ 0.3
CMTM1-204ENST00000336328 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.93■□□□□ 0.3
CMTM1-204ENST00000336328 THEMIS2Q5TEJ8 643 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 KIRREL2Q6UWL6 708 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 DENND6AQ8IWF6 608 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 Q8NA96 180 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
CMTM1-204ENST00000336328 STT3BQ8TCJ2 826 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 MCOLN3Q8TDD5 553 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.93■□□□□ 0.3
CMTM1-204ENST00000336328 OSBPL9Q96SU4 736 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 CRB3Q9BUF7 120 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 LHPPQ9H008 270 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 PCBD2Q9H0N5 130 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 SOX17Q9H6I2 414 aaPredicted RBP16.93■□□□□ 0.3
CMTM1-204ENST00000336328 SLC6A20Q9NP91 592 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 FBXO6Q9NRD1 293 aaPredicted RBP16.93■□□□□ 0.3
CMTM1-204ENST00000336328 TAC3Q9UHF0 121 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 HS3ST3B1Q9Y662 390 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 MAU2Q9Y6X3 613 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 SHANK1Q9Y566 2161 aa16.93■□□□□ 0.3
CMTM1-204ENST00000336328 USP9YO00507 2555 aaPredicted RBP16.92■□□□□ 0.3
CMTM1-204ENST00000336328 MAST4O15021 2626 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 E7ENX8 843 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 SOCS6O14544 535 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 SLC16A8O95907 504 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 ANXA5P08758 320 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 ZGLP1P0C6A0 271 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 EZRP15311 586 aaKnown RBP16.92■□□□□ 0.3
CMTM1-204ENST00000336328 FBLP22087 321 aaKnown RBP16.92■□□□□ 0.3
CMTM1-204ENST00000336328 TAP2Q03519 686 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 NDUFA9Q16795 377 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 PRTGQ2VWP7 1150 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 HSP90AA5PQ58FG0 334 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 CYHR1Q6ZMK1 362 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 Q6ZS92 163 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 PAQR7Q86WK9 346 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 CSNK1A1LQ8N752 337 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 ZNF480Q8WV37 535 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 PSMG3-AS1Q96PY0 264 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 YIPF2Q9BWQ6 316 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 EPS8L2Q9H6S3 715 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 AGPAT4Q9NRZ5 378 aa16.92■□□□□ 0.3
CMTM1-204ENST00000336328 COPG1Q9Y678 874 aaKnown RBP16.92■□□□□ 0.3
CMTM1-204ENST00000336328 MDC1Q14676 2089 aaKnown RBP16.92■□□□□ 0.3
CMTM1-204ENST00000336328 IGLV3-12A0A075B6K2 115 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 TCP11X1B4DZS4 312 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 SMAPO00193 183 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 HAUS5O94927 633 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 DDAH2O95865 285 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 PGAM1P18669 254 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 SLC1A2P43004 574 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 GLRBP48167 497 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 KLC1Q07866 573 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 ZNF425Q6IV72 752 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 UBE2R2Q712K3 238 aaPredicted RBP16.91■□□□□ 0.3
CMTM1-204ENST00000336328 KCNMB4Q86W47 210 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 SLC35F6Q8N357 371 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 CISD2Q8N5K1 135 aaKnown RBP16.91■□□□□ 0.3
CMTM1-204ENST00000336328 METTL27Q8N6F8 245 aaPredicted RBP16.91■□□□□ 0.3
CMTM1-204ENST00000336328 OR11G2Q8NGC1 345 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 SNRNP40Q96DI7 357 aaKnown RBP16.91■□□□□ 0.3
CMTM1-204ENST00000336328 CCDC138Q96M89 665 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 OR2A5Q96R48 311 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 LMF1Q96S06 567 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 GPR21Q99679 349 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 TRIM56Q9BRZ2 755 aaKnown RBP16.91■□□□□ 0.3
CMTM1-204ENST00000336328 TMEM184CQ9NVA4 438 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 C14orf105Q9NVL8 296 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 TAS2R13Q9NYV9 303 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 LUZP4Q9P127 313 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 CTSFQ9UBX1 484 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 TRMT6Q9UJA5 497 aaKnown RBP16.91■□□□□ 0.3
CMTM1-204ENST00000336328 C3orf18Q9UK00 162 aa16.91■□□□□ 0.3
CMTM1-204ENST00000336328 USP9XQ93008 2570 aaPredicted RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 SPTAN1Q13813 2472 aaKnown RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 BLACEA4D250 179 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 KRT87PA6NCN2 255 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 MAP2K7O14733 419 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 HPP00738 406 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 C8GP07360 202 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 ACPPP15309 386 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 TCP1P17987 556 aaKnown RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 FDXRP22570 491 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 UQCRFS1P47985 274 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms