RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ITGALP20701 1170 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 EMX1Q04741 257 aaPredicted RBP13.5□□□□□ -0.25
SF1-202ENST00000334944 TRAF3Q13114 568 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 LRRC66Q68CR7 880 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 OR10Q1Q8NGQ4 319 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 MTG2Q9H4K7 406 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 C14orf119Q9NWQ9 140 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 UCKL1Q9NWZ5 548 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 SATB2Q9UPW6 733 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 A0A0X1KG70 313 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 C12orf71A8MTZ7 269 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 TGM5O43548 720 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 DNTTP04053 509 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 HSD17B1P14061 328 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 KRT6CP48668 564 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ARSFP54793 590 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 PRKG2Q13237 762 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 CDONQ4KMG0 1287 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ZNF648Q5T619 568 aaPredicted RBP13.5□□□□□ -0.25
SF1-202ENST00000334944 TPGS2Q68CL5 300 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ADAMTSL2Q86TH1 951 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 HID1Q8IV36 788 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 METTL4Q8N3J2 472 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 RNF175Q8N4F7 328 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 OR5H6Q8NGV6 325 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 OR6F1Q8NGZ6 308 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 TMBIM1Q969X1 311 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 TRMT2BQ96GJ1 504 aaKnown RBP13.5□□□□□ -0.25
SF1-202ENST00000334944 B3GNT4Q9C0J1 378 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 NUDT4Q9NZJ9 180 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ACTR3BQ9P1U1 418 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ERVK-18Q9QC07 812 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ANAPC2Q9UJX6 822 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 SNX6Q9UNH7 406 aa13.5□□□□□ -0.25
SF1-202ENST00000334944 ZNF99A8MXY4 864 aaPredicted RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 LOC730098B7Z3J9 87 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 DFNA5O60443 496 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 FKTNO75072 461 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 CXCL10P02778 98 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 THRBP10828 461 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 CSF2RAP15509 400 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 HRH2P25021 359 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 ACRV1P26436 265 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 FMO3P31513 532 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 HTR2BP41595 481 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 RAB33AQ14088 237 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 PLEKHG6Q3KR16 790 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 GTDC1Q4AE62 458 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 ATP13A5Q4VNC0 1218 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 LAIR2Q6ISS4 152 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 Q6ZNB5 142 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 OTOP2Q7RTS6 562 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 SNX20Q7Z614 316 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 PLD3Q8IV08 490 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 RBFAQ8N0V3 343 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 STK40Q8N2I9 435 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 ZBTB2Q8N680 514 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 SORCS1Q8WY21 1168 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 PROX1Q92786 737 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 YME1L1Q96TA2 773 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 C1QTNF3Q9BXJ4 246 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 NUSAP1Q9BXS6 441 aaKnown RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 LEF1Q9UJU2 399 aaPredicted RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 DNAH14Q0VDD8 3507 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 AQP12BA6NM10 295 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 CENPXA8MT69 81 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 hCG_2039718K7EN88 272 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 CCL16O15467 120 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 VPS4BO75351 444 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 DBTP11182 482 aaKnown RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 CBLP22681 906 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 HLA-FP30511 346 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 AP1S1P61966 158 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 IL1RL1Q01638 556 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 FAM174BQ3ZCQ3 159 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 CRTC1Q6UUV9 634 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 SLC39A5Q6ZMH5 540 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 NEK10Q6ZWH5 1172 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 AQP12AQ8IXF9 295 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 MRPS31Q92665 395 aaKnown RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 AURKBQ96GD4 344 aaPredicted RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 FAM126AQ9BYI3 521 aaPredicted RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 IKZF5Q9H5V7 419 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 C12orf4Q9NQ89 552 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 RPRD1BQ9NQG5 326 aaKnown RBP13.49□□□□□ -0.25
SF1-202ENST00000334944 HPS4Q9NQG7 708 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 TMEM39AQ9NV64 488 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 MAT2BQ9NZL9 334 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 TANC1Q9C0D5 1861 aa13.49□□□□□ -0.25
SF1-202ENST00000334944 A0A0G2JMP0 313 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 PCP4L1A6NKN8 68 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 TFECO14948 347 aaPredicted RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 SH3BGRLO75368 114 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 FADS2O95864 444 aaKnown RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 LHCGRP22888 699 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 MLLT3P42568 568 aaPredicted RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 SERPINB10P48595 397 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 VEGFBP49765 207 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms