RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PCLAFQ15004 111 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 PTCHD3Q3KNS1 767 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 RBM20Q5T481 1227 aaKnown RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 ADGRG6Q86SQ4 1221 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 RALGPS2Q86X27 583 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 VANGL1Q8TAA9 524 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 SYT11Q9BT88 431 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 DGCR6LQ9BY27 220 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 CPEB1Q9BZB8 566 aaKnown RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 PITHD1Q9GZP4 211 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 USP3Q9Y6I4 520 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 TRBV23OR9-2A0A075B6M9 112 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 IQCF5A8MTL0 148 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 FAM72CH0Y354 149 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 ERI3O43414 337 aaKnown RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 CHRNGP07510 517 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 ADGRE1Q14246 886 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 SNAPC1Q16533 368 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 FAM72AQ5TYM5 149 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 FAM72DQ6L9T8 149 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 NUP54Q7Z3B4 507 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 FAM72BQ86X60 149 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 C2orf73Q8N5S3 287 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 C9orf43Q8TAL5 461 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 FATE1Q969F0 183 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 LRRC58Q96CX6 371 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 ZCCHC3Q9NUD5 404 aaKnown RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 B4DGG1 531 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 CDC7O00311 574 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 RNGTTO60942 597 aaKnown RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 GADD45GO95257 159 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 BDKRB1P46663 353 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 TMEM35AQ53FP2 167 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 COQ5Q5HYK3 327 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF852Q6ZMS4 543 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 SLC29A4Q7RTT9 530 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 KLF16Q9BXK1 252 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 WDR12Q9GZL7 423 aaKnown RBP11.11□□□□□ -0.63
COL4A5-201ENST00000328300 NKX2-4Q9H2Z4 354 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 CRISPLD1Q9H336 500 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 SLC22A14Q9Y267 594 aa11.11□□□□□ -0.63
COL4A5-201ENST00000328300 STRCQ7RTU9 1775 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 NME6O75414 186 aaPredicted RBP11.1□□□□□ -0.63
COL4A5-201ENST00000328300 S1PR4O95977 384 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF57Q68EA5 555 aaPredicted RBP11.1□□□□□ -0.63
COL4A5-201ENST00000328300 C1orf52Q8N6N3 182 aaKnown RBP11.1□□□□□ -0.63
COL4A5-201ENST00000328300 MTERF1Q99551 399 aaKnown RBP11.1□□□□□ -0.63
COL4A5-201ENST00000328300 DPYSL5Q9BPU6 564 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 Q9N2J8 555 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 POMPQ9Y244 141 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 CACNA1SQ13698 1873 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 C2orf78A6NCI8 922 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 H0YGN5 161 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 IL7RP16871 459 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 IL18R1Q13478 541 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 GRM2Q14416 872 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 KRT74Q7RTS7 529 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 TMEM145Q8NBT3 493 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 PPP1R14AQ96A00 147 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF354BQ96LW1 612 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 PLGRKTQ9HBL7 147 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 NFS1Q9Y697 457 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 FAM221BA6H8Z2 402 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 SOCS7O14512 581 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 MAGEB3O15480 346 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 TYROBPO43914 113 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 PRAMEF12O95522 483 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 KLK3P07288 261 aaPredicted RBP11.1□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF763Q0D2J5 394 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 TECRLQ5HYJ1 363 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 PDSS1Q5T2R2 415 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 RPTNQ6XPR3 784 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 SLC36A4Q6YBV0 504 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 GLIS1Q8NBF1 620 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 GOLM1Q8NBJ4 401 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF689Q96CS4 500 aaPredicted RBP11.1□□□□□ -0.63
COL4A5-201ENST00000328300 PIWIL1Q96J94 861 aaKnown RBP11.1□□□□□ -0.63
COL4A5-201ENST00000328300 SLC35A5Q9BS91 424 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 OSER1Q9NX31 292 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 THSD7AQ9UPZ6 1657 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 CAPN5O15484 640 aaPredicted RBP11.1□□□□□ -0.63
COL4A5-201ENST00000328300 NIPAL4Q0D2K0 466 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 PRR23CQ6ZRP0 262 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 FAM46DQ8NEK8 389 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 FAM81AQ8TBF8 368 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 SCRN2Q96FV2 425 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 CD207Q9UJ71 328 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 COQ6Q9Y2Z9 468 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 PRSS51A0A1B0GVH4 220 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 NDUFS4O43181 175 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 SERPINA1P01009 418 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 PRKCGP05129 697 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 ISLR2Q6UXK2 745 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■■□ 23.7
COL4A5-201ENST00000328300 GPR151Q8TDV0 419 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 CAPSLQ8WWF8 208 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 KXD1Q9BQD3 176 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 CDADC1Q9BWV3 514 aa11.1□□□□□ -0.63
COL4A5-201ENST00000328300 TMA7Q9Y2S6 64 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms