RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 SLC22A16Q86VW1 577 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 HORMAD1Q86X24 394 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 SYT12Q8IV01 421 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 RAVER1Q8IY67 606 aaKnown RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 STK40Q8N2I9 435 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 CLIP4Q8N3C7 705 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 TMEM132CQ8N3T6 1108 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 ZNF366Q8N895 744 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 OR2T29Q8NH02 315 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 ADAMTS19Q8TE59 1207 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 DNASE1L2Q92874 299 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 MED8Q96G25 268 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 CCDC115Q96NT0 180 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 MARCH7Q9H992 704 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 TBCCD1Q9NVR7 557 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 MYO10Q9HD67 2058 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 H7C0S8 307 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 UGT2B4P06133 528 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 ANXA5P08758 320 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 CD36P16671 472 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 PBLDP30039 288 aaPredicted RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 GRK5P34947 590 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 LIPAP38571 399 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 ATN1P54259 1190 aaPredicted RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 FKBP1BP68106 108 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 UGT8Q16880 541 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLGN-201ENST00000325617 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 NXPE1Q8N323 547 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 C2orf73Q8N5S3 287 aaPredicted RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 OR4K1Q8NGD4 311 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 ZNF347Q96SE7 839 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLGN-201ENST00000325617 ZDHHC6Q9H6R6 413 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 TMPRSS11EQ9UL52 423 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 PCDHB1Q9Y5F3 818 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 KNL1Q8NG31 2342 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 PRRG1O14668 218 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 KCNK5O95279 499 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 KRT6AP02538 564 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 KRT6BP04259 564 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 HSMCR30P0CW71 290 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 COX7A2P14406 83 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 RCVRNP35243 200 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 KRT6CP48668 564 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 IDH2P48735 452 aaKnown RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 FCGRTP55899 365 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 RPP38P78345 283 aaKnown RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 NOXRED1Q6NXP6 359 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 TRIM46Q7Z4K8 759 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 DNAJB7Q7Z6W7 309 aaPredicted RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 P2RY8Q86VZ1 359 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 CALHM3Q86XJ0 350 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 BBS7Q8IWZ6 715 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 ALG14Q96F25 216 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 PDLIM5Q96HC4 596 aaKnown RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 C6orf62Q9GZU0 229 aaPredicted RBP12.72□□□□□ -0.37
CLGN-201ENST00000325617 RUBCNLQ9H714 662 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 MAGEE1Q9HCI5 957 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 STARD7Q9NQZ5 370 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 KRT84Q9NSB2 600 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 RHCGQ9UBD6 479 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 ACSL6Q9UKU0 697 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 OR51B4Q9Y5P0 310 aa12.72□□□□□ -0.37
CLGN-201ENST00000325617 J3KTA2 159 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 EBLN1P0CF75 366 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 PREPP48147 710 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 MRPL19P49406 292 aaKnown RBP12.71□□□□□ -0.37
CLGN-201ENST00000325617 CLDN8P56748 225 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 SLC35A2P78381 396 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 HKDC1Q2TB90 917 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 TMEM150AQ86TG1 271 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 ANKRD13BQ86YJ7 626 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 SVOPLQ8N434 492 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 FAM83FQ8NEG4 500 aaPredicted RBP12.71□□□□□ -0.37
CLGN-201ENST00000325617 USP7Q93009 1102 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 ZNF641Q96N77 438 aaPredicted RBP12.71□□□□□ -0.37
CLGN-201ENST00000325617 KLHL25Q9H0H3 589 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 ZNF229Q9UJW7 825 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 SZT2Q5T011 3432 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 ANAPC1Q9H1A4 1944 aa12.71□□□□□ -0.37
CLGN-201ENST00000325617 FAM227AF5H4B4 570 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 TBX1O43435 398 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 ZNF821O75541 412 aaPredicted RBP12.71□□□□□ -0.38
CLGN-201ENST00000325617 WBP4O75554 376 aaKnown RBP12.71□□□□□ -0.38
CLGN-201ENST00000325617 WEE1P30291 646 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 KIR3DL1P43629 444 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 NRIP1P48552 1158 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 CRYBA2P53672 197 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 LMAN2Q12907 356 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 SPATS1Q496A3 300 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 FAM26DQ5JW98 314 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.71□□□□□ -0.38
CLGN-201ENST00000325617 PTOV1Q86YD1 416 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 RNF168Q8IYW5 571 aaPredicted RBP12.71□□□□□ -0.38
CLGN-201ENST00000325617 SLC7A5P1Q8MH63 180 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 CHST14Q8NCH0 376 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 OR5AK3PQ8NH89 298 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 699.4 ms