RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ACTR8Q9H981 624 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 RXFP3Q9NSD7 469 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 ABCF3Q9NUQ8 709 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 ZDHHC2Q9UIJ5 367 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 POMT2Q9UKY4 750 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 SH2B3Q9UQQ2 575 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 KLK4Q9Y5K2 254 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 DMDP11532 3685 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 KCNE1BA0A087WTH5 132 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 A0A1B0GTL3 188 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 CPED1A4D0V7 1026 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 GSAPA4D1B5 854 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 SLCO1B7G3V0H7 640 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 AZIN1O14977 448 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 B4GAT1O43505 415 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 TNFSF14O43557 240 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 DUX1O43812 170 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 OR4F21O95013 312 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 UROSP10746 265 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 HGFP14210 728 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 PRDX3P30048 256 aaKnown RBP13.1□□□□□ -0.31
PRPF18-201ENST00000320054 OR1D5P58170 312 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 DAB2P98082 770 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 LAPTM5Q13571 262 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 DOC2AQ14183 400 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 CLPPQ16740 277 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-201ENST00000320054 XKR6Q5GH73 641 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 PAGE2BQ5JRK9 111 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 SH2D4BQ5SQS7 431 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 KANK2Q63ZY3 851 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 GRHL2Q6ISB3 625 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 LETMD1Q6P1Q0 360 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 SPESP1Q6UW49 350 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 EFL1Q7Z2Z2 1120 aaKnown RBP13.1□□□□□ -0.31
PRPF18-201ENST00000320054 TMPRSS11BQ86T26 416 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 CLYBLQ8N0X4 340 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 CARFQ8N187 725 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 AFAP1L2Q8N4X5 818 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 PIWIL2Q8TC59 973 aaKnown RBP13.1□□□□□ -0.31
PRPF18-201ENST00000320054 CNDP2Q96KP4 475 aaKnown RBP13.1□□□□□ -0.31
PRPF18-201ENST00000320054 CD180Q99467 661 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 SHCBP1LQ9BZQ2 653 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 PITHD1Q9GZP4 211 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-201ENST00000320054 EPN3Q9H201 632 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 TNFRSF12AQ9NP84 129 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 MRPS30Q9NP92 439 aaKnown RBP13.1□□□□□ -0.31
PRPF18-201ENST00000320054 TMEM184CQ9NVA4 438 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 FGFR1OP2Q9NVK5 253 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 ANKMY1Q9P2S6 941 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 FTSJ1Q9UET6 329 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 VTI1BQ9UEU0 232 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 SNX7Q9UNH6 387 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 RNF11Q9Y3C5 154 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 TRAF6Q9Y4K3 522 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 MYO15AQ9UKN7 3530 aa13.1□□□□□ -0.31
PRPF18-201ENST00000320054 ZFHX2Q9C0A1 2572 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-201ENST00000320054 A0A0J9YY10 115 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 C4orf47A7E2U8 309 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 HGSO14964 777 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 CDH1P12830 882 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 JUPP14923 745 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 CKMT2P17540 419 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 DRD4P21917 467 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 ACP1P24666 158 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 CXCR2P25025 360 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 CD1CP29017 333 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 ALDH4A1P30038 563 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 ARL1P40616 181 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 CCR8P51685 355 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 SEC24CP53992 1094 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 NHLH1Q02575 133 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 RELAQ04206 551 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 PERM1Q5SV97 790 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 CATSPEREQ5SY80 951 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 ZNF425Q6IV72 752 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 WDR74Q6RFH5 385 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 RNF165Q6ZSG1 346 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 FAM129CQ86XR2 697 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 BAHD1Q8TBE0 780 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 IFI44Q8TCB0 444 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 ZUFSPQ96AP4 578 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 AHCYL2Q96HN2 611 aaKnown RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 CDK15Q96Q40 435 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 DPYSL5Q9BPU6 564 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 DPH7Q9BTV6 452 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 NSRP1Q9H0G5 558 aaKnown RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 ABCG4Q9H172 646 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 NT5DC2Q9H857 520 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 SLC6A20Q9NP91 592 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 PNPOQ9NVS9 261 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 CUEDC1Q9NWM3 386 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 GEMIN8Q9NWZ8 242 aaKnown RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 TSC22D4Q9Y3Q8 395 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 ADAMTS20P59510 1910 aa13.09□□□□□ -0.31
PRPF18-201ENST00000320054 MN1Q10571 1320 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-201ENST00000320054 COL27A1Q8IZC6 1860 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-201ENST00000320054 IGKV1-8A0A0C4DH67 115 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 PCNX2A6NKB5 2137 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 H0YIV9 168 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms