RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 VRK3Q8IV63 474 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 POC5Q8NA72 575 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 KREMEN2Q8NCW0 462 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 PAWRQ96IZ0 340 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 DACH2Q96NX9 599 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ZNF300Q96RE9 604 aaPredicted RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ACTL8Q9H568 366 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ULK1O75385 1050 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 EFNA1P20827 205 aaPredicted RBP15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 CASP3P42574 277 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 RPIAP49247 311 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 ARPC4P59998 168 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 PTSQ03393 145 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 TTC23Q5W5X9 447 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 DESI1Q6ICB0 168 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 DDX53Q86TM3 631 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 ZDHHC13Q8IUH4 622 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 COPS8Q99627 209 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 NUSAP1Q9BXS6 441 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 PARVBQ9HBI1 364 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 B4GALT6Q9UBX8 382 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 OGDHLQ9ULD0 1010 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 NAALAD2Q9Y3Q0 740 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 PRUNE2Q8WUY3 3088 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 RGS13O14921 159 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 SLC22A1O15245 554 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 ASNA1O43681 348 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 LAG3P18627 525 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 HTR1EP28566 365 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 GTF2E2P29084 291 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 CCR7P32248 378 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 GABARAPL2P60520 117 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 SNRPD1P62314 119 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 RACK1P63244 317 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 FOXM1Q08050 763 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 SPANXN4Q5MJ08 99 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 CCDC81Q6ZN84 652 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 PHACTR4Q8IZ21 702 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 LIX1Q8N485 282 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 FBXO30Q8TB52 745 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 YIPF6Q96EC8 236 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 TSSK3Q96PN8 268 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 OSBPL10Q9BXB5 764 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 SUV39H2Q9H5I1 410 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 ASAH2Q9NR71 780 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 TBC1D14Q9P2M4 693 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 STOML2Q9UJZ1 356 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 TBX21Q9UL17 535 aa15.11■□□□□ 0.01
SHROOM1-201ENST00000319854 HOXC11O43248 304 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 UPK1BO75841 260 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 PRR35P0CG20 571 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 FMO3P31513 532 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 EEFSECP57772 596 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 TEAD2Q15562 447 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 AASDHQ4L235 1098 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 COLEC12Q5KU26 742 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 LMNTD1Q8N9Z9 388 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 BRD9Q9H8M2 597 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 CPNE5Q9HCH3 593 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 WDR70Q9NW82 654 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 TESMINQ9Y4I5 508 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 TNPO3Q9Y5L0 923 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 WNT6Q9Y6F9 365 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 LOC100130705A0A1B0GUX0 176 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 ENO2P09104 434 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 EPB42P16452 691 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 PPP3CCP48454 512 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 MASP1P48740 699 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 E2F2Q14209 437 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 SF1Q15637 639 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 GPRC6AQ5T6X5 926 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 C22orf39Q6P5X5 142 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 ZNF783Q6ZMS7 281 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 RGL4Q8IZJ4 473 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 OR10A6Q8NH74 314 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 MCOLN3Q8TDD5 553 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 PHF10Q8WUB8 498 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 ATL1Q8WXF7 558 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 RHBDF1Q96CC6 855 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 ARPC5LQ9BPX5 153 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 TCF25Q9BQ70 676 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 MUC13Q9H3R2 512 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 VAPAQ9P0L0 249 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 CAB39Q9Y376 341 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 FAM234BA2RU67 622 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 TNFRSF10AO00220 468 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 DYRK3O43781 588 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 CLTBP09497 229 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 PBLDP30039 288 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 ERVFC1P60507 584 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 PPP2R2BQ00005 443 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 B4GALNT1Q00973 533 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 UBE2R2Q712K3 238 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 EFL1Q7Z2Z2 1120 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 ZNF555Q8NEP9 628 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 ITFG1Q8TB96 612 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 ZNF689Q96CS4 500 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 CD244Q9BZW8 370 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 SP140LQ9H930 580 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms